Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1856 ATGCAATGCCTTTCATGCCAGGATCATTACGTCCCAGGGGACGCCGGCACCTGCAAGGAGTGCTACGAAGAAGCCAACGAGACCGAGGAGGAGCTCAAGAATGAGATCGACCACTTGAAGGCCAAAGTTGCCTTCCTTAGCCTCTTGTCTCCTGTTGATCACGATAATAGCTCCGATACTGACGTTATTTTGTTTCCCTCCGATGAGAGTTCTGATCTACCCTCCCTGACTGTTCCGGCTCACAAGGCGAGTCGCTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGCGGAAAGACGAAGTGGGACCATAAAGATCAGCGATGTATCATACAATGCTCTTCGTGCCTTTGTTGATTATTTATACACTGCAGAAGCATGCCTTGATGACCAAATGGCTTGTGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCGTATTGTGAGAAGTATTTGATTGCGAGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTTGCTCACCAACACCATGCTACACAATTGCAGGAGGCAGCCTTGGCATTAATCACAGACAACATGGACAAGCTTTCTAAGCATGAGGACTACGAGGATCTGGTTGAGAGTAACTCTCGTATTGTGGTTGAGATCTATGTAGCTTATCTTTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTTCAAAAAGAAATAG 714 0.4552 MQCLSCQDHYVPGDAGTCKECYEEANETEEELKNEIDHLKAKVAFLSLLSPVDHDNSSDTDVILFPSDESSDLPSLTVPAHKASRSPVFRAMLENDMAERRSGTIKISDVSYNALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKAYCEKYLIARLNWEKAVANYAFAHQHHATQLQEAALALITDNMDKLSKHEDYEDLVESNSRIVVEIYVAYLSKQVNTAASKKSFKKK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1856 237 Coils Coil 18 49 - -
Lele27g1856 237 PANTHER SPECKLE-TYPE POZ PROTEIN 53 228 - -
Lele27g1856 237 CDD BACK 170 205 - -
Lele27g1856 237 SMART BTB_4 60 161 IPR000210 GO:0005515
Lele27g1856 237 Gene3D - 163 237 - -
Lele27g1856 237 ProSiteProfiles BTB domain profile. 60 131 IPR000210 GO:0005515
Lele27g1856 237 Pfam BTB/POZ domain 77 159 IPR000210 GO:0005515
Lele27g1856 237 Gene3D Potassium Channel Kv1.1; Chain A 44 162 IPR011333 -
Lele27g1856 237 CDD BTB_POZ_ZBTB_KLHL-like 60 144 - -
Lele27g1856 237 SUPERFAMILY POZ domain 58 158 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1856 Lele-ChrLele27 23377043 23379423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele27g1856 BTB 1.2e-17 CL0033