Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1851 ATGTATGAGCTTTGCTCTGCGTACGAATCACCGGCAACAAAACGACAGAAACCACGGAGTTTGACGCGATTGCTGAAACTGGCCCATAACATGAGAATGCTGAAAGCGGGCCTAGCCGGAGAAGGCAGCGACGGTAAATCAAGTGGCCGGACGGTGTTGGCGGGAGTGAAGTTGGATTCTCCCAGCAGGGAGTTGCTCACATGGGCTTTGGTTAAGGTTGCTCAGCCTGGTGATATTGTGGTTGCTCTTCATGTTCTTGGGGAAGATGACATTGTGAACCGAGACGGGAAGGCGTCGCTTCTTTCGCTTGTCAAGGCATTTGACTCTGTTCTGGCTGTTTACGAAGGTTTTTGCAATTTGAAACAGGTGGATCTAAAGCTCAAAATCTGCCGAGGGTCGTCGGTCCGGAAAATTTTAGTTCGAGAAGCAAACGCCTATTCTGCAACTCATATTTTAGTGGGAACTGCTCAAGGCCTTCATAGAATGCGAACATCTACCTCCGTAGCTAAGTACTGTGCTAAGAAGCTTTCCAAGGACTGCTGGGTTATTGCTGTCAATAATGGAAAAGTTGTATTCAAGAGAGAAGGCTCATCAGCAGCTCCTGTTGACTTGCAAGGAATTGATAGTCGTGGCAAAACTGGCTTGCTTGCTTCAATTCACCGGACATTCAGTTCTAGTTCCAAAGTACTAAATGATGACAACACAGGAATACTTGACATGGGTACTTGCAAACCTTCGGATAACAGCTTAGCCAAGGCCTTTCTTGATTCTACAGAAACCGTTCAGAAACGGAGCTGCTCACTTTGTGATCCATCACATGCATTGCCAAATTCTGCTTGCAACCAAGCTGCAGAAGAGTCTTATGGTGATAGTGACAAAGAGAATTCTATGTCTATAGTTCTTGCACAGCCTACTGAGGCAGCATCAAGTGCTAGCGTTCTGTCAGTCAGAGAATTGCCTGGACTAAAACCCGGTTGGCCACTACTACACAGGACAATTTCATCAGGTCGGCAATCTCCTGGCAGATCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAGTTGCCGAGTAGAAATCTTGCAGGGGATCATGTTCACAGGCCGGCCAGTTCTGATCCTGATCATTATCAATCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCAGTAAATGCTAAAATGGGGACTGCCTCTTCGCCTGACCATAATTCACGGAGAATTCCCAAAGAATTGGAGGGTCTTCATGAGAGATACTCATCAATCTGCAGATTGTTTCAGTACCAAGAACTTTTATTGGCTACGTCAAATTTCTTGCCTGAAAATTTGATCGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGCTATCTTCCTGATGGCAAGGAACTAGCAGTTAAGATCTTAAAGCCCTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATCACTACCTTGCATCACAAGAATATTATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAATCTTCTATTGGTGTATGATTTCTTGTCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATCCACTTGTGTTTGGTTGGACGGAGCGGTATAAGGTGGCAGTTGGTGTTGCTGAGGCTCTGGATTATCTGCATAATAGAGATGCTCGACATGTAATTCACAGGGACGTGAAGTCATCAAATGTATTGTTATCTGAGGATTTTGTACCCCAGCTATCTGATTTTGGGCTTGCTAAATGGGCATCAACCTCATCTCACATAACTTGCGCAGACGTTGCTGGGACCTTTGGCTACTTGGCTCCAGAGTATTTCATGTATGGTAAAGTAAATGCTAAGATTGATGTCTACGCATTTGGAGTCGTACTCCTTGAGCTTCTAACAGGAAGAAAGCCCATAAGTTGTGATTATCCTAAAGGTCAAGAGAGCCTGGTCATGTGGGCAAGTCCCATTCTGAATGGTGGAAAAGTTGCACAATTATTAGATCGAAGTCTGGGTAGTAACTACGATCGGGACCAGATGGAGAGGATGGTCTTGGCAGCCTCGCTTTGCCTCAGACGTGCTCCGAGAGCCAGGCCTCAAATGAGCCTTATAACAAAACTCCTTCAAGGTGACGCTGATGTAATTAAGTGGGCAATGTTCGAAGTTAACTGTTCTAAGGCATCAGAAACGCACGACGATGAAGATTGTCCACCTTCTAATTTACAGTCACATCTCAATCTAGCATTACTTGATGTGGAGGATGATTCACTCTCCATGTGCAGTATTGATCAAAATGTGTCGTTAGAGGACTACTTGAAAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2358 0.4504 MYELCSAYESPATKRQKPRSLTRLLKLAHNMRMLKAGLAGEGSDGKSSGRTVLAGVKLDSPSRELLTWALVKVAQPGDIVVALHVLGEDDIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHILVGTAQGLHRMRTSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSSAAPVDLQGIDSRGKTGLLASIHRTFSSSSKVLNDDNTGILDMGTCKPSDNSLAKAFLDSTETVQKRSCSLCDPSHALPNSACNQAAEESYGDSDKENSMSIVLAQPTEAASSASVLSVRELPGLKPGWPLLHRTISSGRQSPGRSLVRQISVVQWAMQLPSRNLAGDHVHRPASSDPDHYQSLALDSESGAIVPVNAKMGTASSPDHNSRRIPKELEGLHERYSSICRLFQYQELLLATSNFLPENLIGEGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSKKNPLVFGWTERYKVAVGVAEALDYLHNRDARHVIHRDVKSSNVLLSEDFVPQLSDFGLAKWASTSSHITCADVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISCDYPKGQESLVMWASPILNGGKVAQLLDRSLGSNYDRDQMERMVLAASLCLRRAPRARPQMSLITKLLQGDADVIKWAMFEVNCSKASETHDDEDCPPSNLQSHLNLALLDVEDDSLSMCSIDQNVSLEDYLKGRWSRSSSFD 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1851 785 CDD USP_Like 51 183 - -
Lele27g1851 785 FunFam Putative receptor-like serine/threonine-protein kinase 515 726 - -
Lele27g1851 785 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Lele27g1851 785 Gene3D Phosphorylase Kinase; domain 1 405 514 - -
Lele27g1851 785 SMART serkin_6 440 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1851 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 183 - -
Lele27g1851 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Lele27g1851 785 Pfam Protein kinase domain 444 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1851 785 Gene3D Transferase(Phosphotransferase) domain 1 515 725 - -
Lele27g1851 785 SUPERFAMILY Protein kinase-like (PK-like) 422 718 IPR011009 -
Lele27g1851 785 PANTHER OS08G0249100 PROTEIN 107 723 - -
Lele27g1851 785 ProSiteProfiles Protein kinase domain profile. 440 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1851 785 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 49 186 - -
Lele27g1851 785 Pfam Universal stress protein family 50 183 IPR006016 -
Lele27g1851 785 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 409 514 - -
Lele27g1851 785 Gene3D HUPs 49 186 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1851 Lele-ChrLele27 23341868 23345439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1851 428 784 Trihelix Transcription Factor Family AT1G70460 40.385 2.48e-73 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele27g1851 Pkinase 3.1e-43 CL0016