Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1849 ATGGGCTCGTGTGGGAAATCAAGTATATTAGATGACGCCCCCAGCGGGTCTGTTATTGAGCAGCAGTCATGCGCAGAGATTCCATTGCAGTCTATTCCTGTGCAGCGGTCCTGTCCAGGAGTAACCTGCAATGCATTGGACTCTAATGTCGAGCGCTCCAATATGATGGAGGTCCACACTGGGTCTGCAAGCACCATTGATGTTACAGAGATGTCCAGAGATTCATCGTTGATGGTGAACAAAGATGAAAATACTGATAGGTTACAATGCTCATGTACAGTAGTTATTTGCAATGCGGTGGACTGTAATGTTGAGCACTCCAATATGATAGAAGGCTGTATGGATTTGTCTGGAGAGGTCCACACTGGGTCTTCAAGCTCCATTGATGTTCCAGAGATGTCCAGAGATTCTTTGTTGATGGCGAACAAAAGTGAAAATACTGATAGTTTACAGTGGTCCTGTCCAGTAGTTACTAGCAATGCGTTGGACTCTAATGTTGAGCACTCCGATATGATGGAAAGCTGTATGAATTCGTCTAGAGAGGTCCACACAGGGTCTGCAAGCCCTGTTGATGTTACAGAGGTGCCCAAAGATTCATTTTTTATGGTGAATAAAAATGAAAATAATGACATGTTACAACAGTCTTGTCCAGTAGTAAGTTGCAATGTGTTGGACTCTAATGTTGATCACTCCAATATGATGGAAAGTTGTATGAATTTGTCTAGAGAGGTCCACACTGGCTCTGCAAGCTCCATTGATGTTCAAGAGATGTCCAGAGATTCAATGTTGATGGTGAACAAAAATGAAAATACTGGTATATTACAACAGTCTTGTCCAGCAGTAATTTCCAGAGTGTTGGGCTCTGATGCTGATCACTCCAATATGACCGAAAGTTGCATGAATTTTTCTAGAGAGGTCCACACTGGGTTTGCAGGCTCCATTGATGTTCAAGAGATGTCCAGAGATTCAATGTTGATGGCGAACAAAAATGAAAATACTGGTATATTACAACAGTCTTTTCCAGCAGTAATTTCCAGTGTGTTGGACTCTGATGTTGAGTGCTCCAATATGGTTGAAGGTTGTATGAATTCGTCTAGAGAGGTCCACTCTGGGTCTGCAAGCCCCATTGATGCTTCAGACATAACCAGAAATTCATTGTTGGAGAACAAAAGTGAAAATACTGATATTTTACAACAACCCTGTCTAGTAGCTACTTGCAATGCGTTGGACTCTAATGGTGAGCACTCCAACGTGATGGAAGGTTGTATGAATTCGACTAGAGAGGTGGCAAGCTCCATTGATGCCCCAGAGGTAATCAGAGATTCATTGTTGATGGAGAACAAAAGTGAAAATACTGATATTTTACAACAGTCCTGTCCAGTAGTAACTAGCAATGCGTTGGACTGTAATGTTGAGCACTCCAACCTGATGGAAGGTTGTATGAATTCATCTAGAGAGGTCCATACAGGGCCTGCAAGCCCTATTGATTTTCCAGAAATGTCTGAAGATTCATTGTTGACGGTGAATAAAAGTGAAAATACTGAGATGTCACTTCTGGAGAAAACCTCAAAGAATGATAGCCAGACTTGTCCAAGTATATTTTGTGCGCAGATTAAACTTTCTAATCTAGAAAGTGTCAGGTTGGTCTCAGAGGGAAAACCTCATGCCAAAGATGGCCTCAAAATGCCATCAGACTTCATATTGACCAGGGGTTCACCTAAGGATTGTGTTAATCAGGATGGGCATAAGGATGATAAGAGCAACATATTCCACTCTGCAGGAGTTTCTTTAGCACTCATGGAAGGTGAAAATGATGCTGGTTTACCAACTGGCTTCCTGGTTTATTGCCACCAACAAAGCGAACAAGAGGACACAGTGAGGAAAGCTAATCCAGTGTTGGAGGGTGTGAACGGAAGTGATTTGAATTGTGGGATTGAAGCAGATGCCTGCAAGCGGACTCATTCACAGGGCAGTGAAGTACCCACAGATGTAATATATACTAAAGCAGAGGCCATAAGTGATCAGCTGCATGATCAGAAAGATGGTGGTGATGAGAATAGTCATTTTGAAGACTTTGTTGATAAAGAAAGTATCATTGACACACATGTCCAAGAATTCTCCTCACCAGGCCATCAAAAGATCTTGGGGAGTTTGCCTGTAGCTTATTCACCTGGAGAGGCCACCCACTCAGAGAGGGGGATTGATAATATTGATACTGATTTTGATGCAGCAGATGTTGTGGAAGTTAAGGGAAAAAATAATGATGTTATGACTGAAATAAATGTTGAAATGAAGAATATGCCGCTAGATGATAATGCATGTAAGTTAAGTGATAGTTCCTCAAAAACAGATGCCAACTGTACCTTGAGAAAAACGTTTCTTCCTGAATCAGATCTTCCTTCTGTTGATTATAGCAGTATTAGTTCTCCAAAGGATGTGCCTAATCTTCTCAAGGAGGTCAATGGTTCCATCACTTATAGTAGCCTTGTGGGTGATTCTGGAGAGGCAGACTGTATTAGGAAAGATATTATACATGTTGATTGTTTCTCTGAAAGCAATTATCCTAGGAATACATCCTTGCCTATTCGAAGGAATAGTCGAAGAAGTAAATCTGGTCATAAGACGCAGAGCAGAAGGGCTTCGAGGAAATGCAAGAACAAAACCAGTGTGCCACACCTAGGTGGGGATGTGAAGACAATCTTGGAGGCTGCTAGAAAGAAAAGAAGCTGTTTCTCTAAACCAGCTCGTTCTTCTATCTGGGGATTGGTAGGAAACATTAATAAGTTTTTTGAACAAGATAATGAGCTTGGAGTTGATGAAGTTATGTGTCAAGGATTGGGGAAGGTGAGAGGTGCCCGCAAAAGTGGGAAGAGAAACAAGAGTGGTGCAATTTCTAGCTCATTGAGTTCAATGAAGAAATGCTGTGCTTCAACTACTCGTGTTCGTCTGAAGATTAAACTGGGGAAAGAAGTTCATTTAAGTTGTTCAGATGTCTTGCTTCCAGAGGTTATGAATGGTTCAGGTTCTGCTTCTAATGTGGGGCCTGGTCCAGGCTCTCAGGAAAGAAACAGCGATGCTGGAGATAAATGTTCAGAAGAGGTTGCAGTAGGCAAGTCTGAATCTTTAACAGACAACCTGGATGAGGACGCTCTTGTTCTGAATGGACAAATGGTAAATCACCACTTAGAAGCTGCTGCAACAACAGAAAAGCCAGATGAGGTCACAGAGGAAGTATGTCATATGATTCCTCCAGAGAGGATGATTGAACCGTTGAGAGAGACAGTTAATGATAAGGGGATGGATCCTGGAACTTCGCCTGATTCGGAAGTTATCAATTCAATTCCTGAAGTCCAGGTTGGAGAAAGACATCAACAAGGTTTGCAGGATGCTATTCTTGATTCTTCTAAGGCGTCTGATGCTCTTGGAGGAGTATCAGATTGCAGGAGAAGGAAGAAGAAAGACAAACTTACTTCCTCAAGTAGTTCTATTGTTGAAGATGGCTCACAAGGGCCACCAAGGAAAACTAAAACTAAACACTCCAAGAATCGTGGACGTAAAAAGAATTCCAATGATGTGGTTTGCTCCATGAGTTTGCATACTTCCACTGGTATAAATGCTGTGAGCTACTCAGTAAGCCATAAAGAATTATCCAGTGAATCATTGCCCCCATCTGGAGAGATTGAACTTGAAGACTCCACTGAGGCTTTGAAAGTCAAAACTAGCATGGAAGTTGAAACTACTTGTAGCCCAGATGACAACTATGAGCTTTTAGAATCCCAGGGCATTGGTAATTTGCTGTCTTCAGCCAGATCCTCAGGTAGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCATCACCCCCAAACCCAAATCAAAAGCTTCTGACTCAATGAGCCGGAAAAAGACTGATAGCAGACGTAGGGAGAAACAGCTGAAACCTATTAAGAAGAGTGAAGTCAAGGGAAAAGCTGTCTCTGAGAAAGTTATCTCTGAAGCAGAAGATTGTCTGCATGCAGAACATGTTGTTGATGGAAGTTATAAATTGGATGATATCGAAAAAATTGCTGGTGACAACAAAGTATCAGTAAATGGATCCAATTCGGACAAGGCAGTTGGTACTGGTTTGGAGGAGCAGCATCCATCACCTCATAATGCATGGGTGCGCTGTGATGATTGTCACAAGTGGCGGCATATTCCCGTTGAGCTTGCAGATCTAATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAATGATGAAGCCTTTTCTGATTGCTCTATCCCCCAAGAAAAGTCAAATGCAGAGATCAACGCAGAGTTGGGATTATCGGATGCTTCAGGTGAAGAAGATGCTCATGAAGGCTGTAAAAATTATAAGAAGTTGGAATATCATTACCCAACAGTTCACCAGGAGTCAACTTTTACCCATATTCTTACTAATGAGTTTCTGCACCGCAGCCGCAAAAATCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACAACCATCAGAAGGTAGGTTTGGTTGTGGGGATGAATGTCTAAATCGGATGCTCAACATTGAATGTGTTCAGGGAACCTGCCCATGTGGGAATCTTTGTTCAAATCAACAGTTCCAGCAACACAAGTATGCCAGCTTGACGTGGTTTAAATGTGGGAAAAAAGGTTACGGGTTGAGGGCAATTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGGGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGCCGTACAGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCATTGAGGGATATAAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAAGTCATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACAGAAGATGGTGAAATTGAAGGCAGTATACCTATATCTGATGTTATGCAGGCTGAAAGGAATTTGTCAAAAGACAGAGATCTAGTTGACAAGTCCAGAAGTGCTTCAGTGCCCAATAATAATAATCAGGAGAAAGAGAACTCTGCAAACCCATCTCCTGCTATTTCCCTGTTGCACTGCCCATTAGATGTGGAAGATTCAATGGGCAAATTGCCATCATCTGACGTGGAAGAAATTTCTAAACAAATGGAGGATGTAATTAGTAAATCAGAGCTTCCTGACAATATTTCTTCCATCCAAAGAATGGAGGCTTCCGCTGCACCTATTAGTAAAGTGATGTCAAAGTTTATTAAGAAGAAAAGGGAATCCAAGCCTGAAATAGTTGAAGACAGGCCTGGTTTTCCAAAAACACATCTGCTTGTGAAAACTTCTCGAGCAAATGGTTCGGTTAAAAAGGGAAAGGTTCACGCTAATCATTCAAATGGCCTCAAAGCTGCAGTGACAGCCAACAGATTGCAGGCAACATCTATCAAACCTAAAAAGGTGGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAAGATGGAGAAGGAGGGATAAGCAAAAGAAAAGATGCAACCAAAGGCTACTTAAAGCTTCTGCTTCTCACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGCGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAACGATGTAATTAACAAGAATGGTCTACAGATGTTGCATAACATTATGAAGCAGTACAGACGGGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCTAGCAAGATTTTGACATTTGAACACATTAATGGCGGGCCCCCCTGTCATGGAATGGAGAGCTTTAGGGAGTCCATGTTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTTCGGGACAGATGGATTCGTAGACCTTTCAGAAGACATGGTTATGGGGACCGAGATGATTTTAAGGGAGAATCTCATAGGAATTTTAATTGCAATAGATTTTCAGCATCACAGAATCATAGGCGGGAGCCAGATGTTAGACCCACGGAAGCAATAGATTGTGTCCAGCAATCAAAACCTGTGACAACTTCGGTAGATGCTGGTGCCCAGGAGGGCCGCTCTGCACTGTCTTCAGATGCGTGTAAAGTTGATGGGACAAAAAGGCGTAAGCGTAGAAGCAGATGGGATCAACCTGCAGAGACGATTTCAAATTCATCATCTAGTCCATGTAAGAAACAAAATGTTGATTCTGAGCTATCAATGCATGCTGATGGAGCTATTGACTCTTTTGATGGAAGTCAGAACATTAGTGAGGATTTCCCCCCAGGTTTTGCGTGTCCTGTTCAACCACAATTGGGTTCTTCGAATGCTTCACCTCACCCTGTTGATCTTGCTTTGCAAAATGTGGGCAATTCTGGGTGTTCCCCTGATACAGTAATTGGACATCCAAAGGAGAAATTTAATTCTCGCATGCCTGTCTCATACGGAATGCCATTATCTTTTGTCCAGCAGTTTGGCACACCTCATGCTGAAATATCAGGGAGTTGGGTCACTGCGCCAGGTGTGCCTTTTAGCCCATTTCCTCCAGTGCCCCCCTATCCACGGGATAATAAAGACTGTCAACCTTCTAGTTCTACTAATGCTGCAGCTGTAGATCAGCCTGTCGAAGTTCAGCAACGGGATATGAGTGGTCCGGTTGGTTGTTACTCTGATGATCCTACTCTCAGCACAACTGATACTATCCCTGAATACATTGACCTGCCACATGAAGATGATCAACAACTTTATAAACGTTTGAAAGGTTCCTCTTGTGATTTGGGAAGCAAGTACTTTAGACAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTCAGGAGGAATGCGTGGGGATCGAGTGGGAACTACACTGTTGGAGGTAACTGCAGTGTAAGTAGTGTAGGAGATGAACCAAATGAGTCAAAATTTGCATATCCTTCAGAGGATGTAATCTGTAGAGCGGAGGAAGGTGACAATAATGTTCGGTAA 7302 0.4221 MGSCGKSSILDDAPSGSVIEQQSCAEIPLQSIPVQRSCPGVTCNALDSNVERSNMMEVHTGSASTIDVTEMSRDSSLMVNKDENTDRLQCSCTVVICNAVDCNVEHSNMIEGCMDLSGEVHTGSSSSIDVPEMSRDSLLMANKSENTDSLQWSCPVVTSNALDSNVEHSDMMESCMNSSREVHTGSASPVDVTEVPKDSFFMVNKNENNDMLQQSCPVVSCNVLDSNVDHSNMMESCMNLSREVHTGSASSIDVQEMSRDSMLMVNKNENTGILQQSCPAVISRVLGSDADHSNMTESCMNFSREVHTGFAGSIDVQEMSRDSMLMANKNENTGILQQSFPAVISSVLDSDVECSNMVEGCMNSSREVHSGSASPIDASDITRNSLLENKSENTDILQQPCLVATCNALDSNGEHSNVMEGCMNSTREVASSIDAPEVIRDSLLMENKSENTDILQQSCPVVTSNALDCNVEHSNLMEGCMNSSREVHTGPASPIDFPEMSEDSLLTVNKSENTEMSLLEKTSKNDSQTCPSIFCAQIKLSNLESVRLVSEGKPHAKDGLKMPSDFILTRGSPKDCVNQDGHKDDKSNIFHSAGVSLALMEGENDAGLPTGFLVYCHQQSEQEDTVRKANPVLEGVNGSDLNCGIEADACKRTHSQGSEVPTDVIYTKAEAISDQLHDQKDGGDENSHFEDFVDKESIIDTHVQEFSSPGHQKILGSLPVAYSPGEATHSERGIDNIDTDFDAADVVEVKGKNNDVMTEINVEMKNMPLDDNACKLSDSSSKTDANCTLRKTFLPESDLPSVDYSSISSPKDVPNLLKEVNGSITYSSLVGDSGEADCIRKDIIHVDCFSESNYPRNTSLPIRRNSRRSKSGHKTQSRRASRKCKNKTSVPHLGGDVKTILEAARKKRSCFSKPARSSIWGLVGNINKFFEQDNELGVDEVMCQGLGKVRGARKSGKRNKSGAISSSLSSMKKCCASTTRVRLKIKLGKEVHLSCSDVLLPEVMNGSGSASNVGPGPGSQERNSDAGDKCSEEVAVGKSESLTDNLDEDALVLNGQMVNHHLEAAATTEKPDEVTEEVCHMIPPERMIEPLRETVNDKGMDPGTSPDSEVINSIPEVQVGERHQQGLQDAILDSSKASDALGGVSDCRRRKKKDKLTSSSSSIVEDGSQGPPRKTKTKHSKNRGRKKNSNDVVCSMSLHTSTGINAVSYSVSHKELSSESLPPSGEIELEDSTEALKVKTSMEVETTCSPDDNYELLESQGIGNLLSSARSSGSKLPKSLTSCKIITPKPKSKASDSMSRKKTDSRRREKQLKPIKKSEVKGKAVSEKVISEAEDCLHAEHVVDGSYKLDDIEKIAGDNKVSVNGSNSDKAVGTGLEEQHPSPHNAWVRCDDCHKWRHIPVELADLIEETKCTWTCKDSNDEAFSDCSIPQEKSNAEINAELGLSDASGEEDAHEGCKNYKKLEYHYPTVHQESTFTHILTNEFLHRSRKNQTIDEIMVCHCKQPSEGRFGCGDECLNRMLNIECVQGTCPCGNLCSNQQFQQHKYASLTWFKCGKKGYGLRAIEDISKGKFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEIEGSIPISDVMQAERNLSKDRDLVDKSRSASVPNNNNQEKENSANPSPAISLLHCPLDVEDSMGKLPSSDVEEISKQMEDVISKSELPDNISSIQRMEASAAPISKVMSKFIKKKRESKPEIVEDRPGFPKTHLLVKTSRANGSVKKGKVHANHSNGLKAAVTANRLQATSIKPKKVVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDVINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIRRPFRRHGYGDRDDFKGESHRNFNCNRFSASQNHRREPDVRPTEAIDCVQQSKPVTTSVDAGAQEGRSALSSDACKVDGTKRRKRRSRWDQPAETISNSSSSPCKKQNVDSELSMHADGAIDSFDGSQNISEDFPPGFACPVQPQLGSSNASPHPVDLALQNVGNSGCSPDTVIGHPKEKFNSRMPVSYGMPLSFVQQFGTPHAEISGSWVTAPGVPFSPFPPVPPYPRDNKDCQPSSSTNAAAVDQPVEVQQRDMSGPVGCYSDDPTLSTTDTIPEYIDLPHEDDQQLYKRLKGSSCDLGSKYFRQQKWNNSKIHRPWFRRNAWGSSGNYTVGGNCSVSSVGDEPNESKFAYPSEDVICRAEEGDNNVR 2433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1849 2433 SMART PostSET_3 1672 1688 IPR003616 -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 857 893 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 866 886 - -
Lele27g1849 2433 ProSiteProfiles AWS domain profile. 1495 1545 IPR006560 GO:0005634|GO:0018024
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1268 1288 - -
Lele27g1849 2433 Pfam SET domain 1558 1664 IPR001214 GO:0005515
Lele27g1849 2433 MobiDBLite consensus disorder prediction 2092 2174 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 2155 2172 - -
Lele27g1849 2433 Pfam AWS domain 1510 1544 IPR006560 GO:0005634|GO:0018024
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1294 1321 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1143 1159 - -
Lele27g1849 2433 Pfam CW-type Zinc Finger 1387 1433 IPR011124 GO:0008270
Lele27g1849 2433 ProSiteProfiles SET domain profile. 1547 1664 IPR001214 GO:0005515
Lele27g1849 2433 SMART set_7 1547 1670 IPR001214 GO:0005515
Lele27g1849 2433 FunFam Histone-lysine N-methyltransferase 1446 1703 - -
Lele27g1849 2433 SMART shorttest3 1495 1546 IPR006560 GO:0005634|GO:0018024
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1736 1766 - -
Lele27g1849 2433 ProSiteProfiles Zinc finger CW-type profile. 1381 1435 IPR011124 GO:0008270
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1132 1194 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 2112 2128 - -
Lele27g1849 2433 PANTHER SET DOMAIN PROTEINS 881 2158 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 2139 2154 - -
Lele27g1849 2433 SUPERFAMILY SET domain 1475 1685 IPR046341 -
Lele27g1849 2433 Gene3D - 1376 1440 - -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1746 1766 - -
Lele27g1849 2433 Gene3D SET domain 1442 1696 IPR046341 -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1268 1321 - -
Lele27g1849 2433 ProSiteProfiles Post-SET domain profile. 1672 1688 IPR003616 -
Lele27g1849 2433 MobiDBLite consensus disorder prediction 1006 1030 - -
Lele27g1849 2433 CDD SET_SETD2 1546 1688 IPR044437 GO:0010452|GO:0046975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1849 Lele-ChrLele27 23307880 23321942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1849 1530 1687 C2H2 Transcription Factor Family AT2G23740 34.254 2.02e-20 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele27g1849 SET 2.3e-20 No_clan