Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1844 ATGTCAAAACAGAATCGTCGTCCGTCGTTCTCTGCCTCCACGACATCGTCGTTAGCGAAACGACATGCGTCGTCATCGTCGGAGAATGTGGGGAAGCCTACGGCGGCCTTGCCTCCACACATGGCTAAGAAGCGAGCGCCTCTCGCCAACTTGACCAATCAAAAGAACGTGTCTTACGCTGCATCGCCAAACCCTCTGCCATCATCAACTCTGGTACCTGGTGCAACTAAAATCGCCAAGACGAACAAGGAACCCACCTCGTCCAATGTTAAATCAAGTGCGGTTGTTTTCCCGAAGGCTACTTCATTCACACAAAAAGATGAAGCTGTTCCTACAGTTGCAGCTTTCACCGTTCCAGTGTGTACCAATTTGGATGCAAAATCAAGTTCCATTGATTTTCCTATGGTTGCTTCTGCTTCACAGAAGTCTGAAGCTGCTCCTGCAGTTTCCAATTCCAACGTCCCTCTTACAAGCATCATGGATGTTTCTCCTAGTAAAACAGATGGGATGTCTGTTTCTATGGATGAGACTACGTCTACTTGCGATTCATTCAACAGTCCTGAGGTTGAATATTTGGACAATACCGATGTTTCAGCTGTTGACTCTATTGGAAGAAAGACATTGAACATTCTGAACATCTCTGATAATACAGATAGAACAACAGGCAACATTTGTAACAGAGACGTACTTGTTGAGTTGGAGAGAGAAGACAAAATTGCCAATATCGATAATAATTACATGGATCCACAGCTCTGTGCGACCTTTGCTTGTGACATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTACATGGAGAGAGTTCAAAAGGACATAAAGCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTAGAGGTGGCTGAAGAGTACCGGCTTGTGCCTGATACGTTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCTATGAACAGGCAAAAATTACAGTTGCTTGGAGTTGCCTGCATGATGATTGCCTCTAAATATGAGGAAATTTGCGCGCCTCAGGTGGAAGAATTTTGTTATATAACTGATAACACATACTTCAAGGACGAGGTTTTGCAAATGGAATCTGCGGTGTTGAATTTTCTCAAGTTCGAAATGACGGCCCCAACAATTAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTCAAGGAGTGAACGAGGTGCCATCATTGCAATTAGAGTGCTTGGCCAACTACATTGCAGAACTCTCTCTCTTGGAGTACAGCATGCTTTGTTATGCCCCTTCACTTGTAGCTGCTTCTGCAATTTTCCTCGCCAATTATCTTCTCTTCCCTTCTACCAAGCCCTGGAACTCTACATTGCAACATTATACACTTTACCAGCCTTGTGATTTGAGCGACTGCGTCAGGGATCTCCATCTTCTGTGTTGTAACACCCATAGTTCTAGTTTACCCGCAATCCGAGAGAAATACAGTCAGCACAAGGTGGAATTCTTACTCGAATGTTTTCGAGTTCATTTGTTATATAACAATCTGTTTACTTGA 1560 0.4404 MSKQNRRPSFSASTTSSLAKRHASSSSENVGKPTAALPPHMAKKRAPLANLTNQKNVSYAASPNPLPSSTLVPGATKIAKTNKEPTSSNVKSSAVVFPKATSFTQKDEAVPTVAAFTVPVCTNLDAKSSSIDFPMVASASQKSEAAPAVSNSNVPLTSIMDVSPSKTDGMSVSMDETTSTCDSFNSPEVEYLDNTDVSAVDSIGRKTLNILNISDNTDRTTGNICNRDVLVELEREDKIANIDNNYMDPQLCATFACDIYKHLRASEAKKRPSTDYMERVQKDIKPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVNEVPSLQLECLANYIAELSLLEYSMLCYAPSLVAASAIFLANYLLFPSTKPWNSTLQHYTLYQPCDLSDCVRDLHLLCCNTHSSSLPAIREKYSQHKVEFLLECFRVHLLYNNLFT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1844 519 Pfam Cyclin, N-terminal domain 258 384 IPR006671 -
Lele27g1844 519 SUPERFAMILY Cyclin-like 387 501 IPR036915 -
Lele27g1844 519 CDD CYCLIN 288 377 IPR013763 -
Lele27g1844 519 MobiDBLite consensus disorder prediction 1 32 - -
Lele27g1844 519 PANTHER CYCLINS 195 498 IPR039361 -
Lele27g1844 519 FunFam Mitotic cyclin 6 272 372 - -
Lele27g1844 519 Gene3D - 272 385 - -
Lele27g1844 519 CDD CYCLIN 385 478 IPR013763 -
Lele27g1844 519 Pfam Cyclin, C-terminal domain 387 502 IPR004367 -
Lele27g1844 519 SMART Cyclin_C_2 387 508 IPR004367 -
Lele27g1844 519 SMART cyclin_7 391 479 IPR013763 -
Lele27g1844 519 SMART cyclin_7 294 378 IPR013763 -
Lele27g1844 519 ProSitePatterns Cyclins signature. 289 320 IPR006671 -
Lele27g1844 519 MobiDBLite consensus disorder prediction 1 46 - -
Lele27g1844 519 MobiDBLite consensus disorder prediction 159 181 - -
Lele27g1844 519 SUPERFAMILY Cyclin-like 248 384 IPR036915 -
Lele27g1844 519 FunFam Cyclin A1 374 504 - -
Lele27g1844 519 Gene3D - 258 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1844 Lele-ChrLele27 23275435 23278279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1844 4 508 Core Cell Cycle Gene Families AT1G44110 58.580 0.0 541