Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1841 ATGTCATCAAGGGTCGATGTAGGTGGCAGCAATCGTATAGCAGCCCTCAATGACACACCATCTATTAATGGCCATAATGGTCACTTGGCCCCAAAGAAACCTGGGTGGAGGAAGTTTCTATCCTTTGTAGGTCCTGGTTTTCTTGTCTCCTTGGCTTACCTTGATCCTGGAAACTTAGAAACTGATCTGCAAGCTGGAGCTAACCACAGATATGAGCTGCTATGGGTGATACTTATTGGGCTATCGTTTGCACTCATTATTCAGTCATTGGCTGCAAACCTTGGGGTCTGCACTGTTGTTGGCACAGCCTATGCGCTTAACTTACTGTTCCACTTCCCACTATGGGCAGGAGTTCTCTTGACCGGCTTCTCCACTCTCTTGCTTCTTTCTCCTCAGAGATTTGGGGTTAGTAAGTTGAAACTGCTCATATCAATTCTAGTATTTGTAATGGCGGGATGTTTCTTTGGGGAGATGAGCTATGTGAGACCCCCAGCTTTTCAAGTTTTGAAGGGAATGTTTGTCCCTAAACTTGGTGGTGAAGGAGCCGTTGGAGACGCGATTGCCCTTCTCGGTGCCCTTGTCATGCCGCACAACCTCTTTCTCCATTCTGCTCTTGTACTCTCTAGAAAGGTACCCAGCACTAGGCGTGGAACCAATAATGTGTTGGGAAGGTCCAGCAAAACCGTTTATGCTATAGCAGTTCAGGCCTCTGGGCAAAGCTCTGCCATCACTGGCACCTATGCAGGGCAGTACATCATGCAGGCATTAATTATGAACATGCCTATTCATGATTTGTTTGATTCATTTCATGGAAATCTATTGACAAAGGTTGTTTCTCTCTGTAGGGATTCTTAG 855 0.462 MSSRVDVGGSNRIAALNDTPSINGHNGHLAPKKPGWRKFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLSFALIIQSLAANLGVCTVVGTAYALNLLFHFPLWAGVLLTGFSTLLLLSPQRFGVSKLKLLISILVFVMAGCFFGEMSYVRPPAFQVLKGMFVPKLGGEGAVGDAIALLGALVMPHNLFLHSALVLSRKVPSTRRGTNNVLGRSSKTVYAIAVQASGQSSAITGTYAGQYIMQALIMNMPIHDLFDSFHGNLLTKVVSLCRDS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1841 284 PRINTS Natural resistance-associated macrophage protein signature 186 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 PRINTS Natural resistance-associated macrophage protein signature 83 109 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 PRINTS Natural resistance-associated macrophage protein signature 111 130 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 PRINTS Natural resistance-associated macrophage protein signature 136 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 220 257 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 Pfam Natural resistance-associated macrophage protein 98 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1841 284 Pfam Natural resistance-associated macrophage protein 220 261 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1841 Lele-ChrLele27 23259177 23261124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1841 9 220 Inorganic Solute Cotransporters AT1G15960 50.602 1.70e-78 245