Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1838 ATGGCTTCAGCAGATCTACAGCTACCACCCGGCTTCAGATTCCACCCGACGGATGAGGAGCTCGTGATGCACTATCTCTGTCGTAAATGTGCATCGCAGCAGATAGCTGTTCCGATTATTGCGGAAATCGATCTTTACAAGTATGATCCTTGGGACCTTCCAGGCCTGGCTCTGTATGGGGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGGGCAGCCGGGACCGGCTACTGGAAGGCGACCGGAGCAGATAAGCCCATCGGTCATCCGAAACCGGTAGGGATCAAGAAAGCTCTGGTATTTTATGCAGGAAAAGCGCCCAAAGGGGAGAAAACAAATTGGATCATGCATGAATACCGTCTCGCAGATGTGGATCGCTCCGCTCGCAAAAAGAATAGCTTAAGGCTCGATGACTGGGTGCTTTGCCGTATCTACAATAAGAAAGGTGCCATCGAGAAGCAGCCGAGTCCTCTGAGCCGGAAAACTGAGTCATCAGAAATAATCGAGGACCAGAAGCCACTGCATTTGACCCGTGGCGGCGCACTTCCTCCTCCGCTGCCACCGGCTCAAGCGCCGTCGGCGATGACCGATTACATGTATTTTGACACGTCGGATTCAATCCCGAAGCTGCACACGGATTCGAGCTGTTCGGAGCAAGTGGTGTCGCCGGAGTTCGCCAGTGAGGTGCAGAGCGAGCCCAAGTGGAATGAGTGGGAGAAGAACCTTGATTTTCCGTATAATTACATGGATGCCACTCTGGGCAATAACAGCTTCGGATCGCAGTTTCAGGGCGGCGGGCAGATGTCGCCGTTGCAGGACATGTTCATGTACCTGCCGAAGCCCTTCTAA 882 0.5351 MASADLQLPPGFRFHPTDEELVMHYLCRKCASQQIAVPIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPSPLSRKTESSEIIEDQKPLHLTRGGALPPPLPPAQAPSAMTDYMYFDTSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLDFPYNYMDATLGNNSFGSQFQGGGQMSPLQDMFMYLPKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1838 293 PANTHER NAC TRANSCRIPTION FACTOR 56 8 214 - -
Lele27g1838 293 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Lele27g1838 293 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Lele27g1838 293 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Lele27g1838 293 FunFam NAC transcription factor 17 162 - -
Lele27g1838 293 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1838 Lele-ChrLele27 23241238 23242733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1838 6 293 NAC Transcription Factor Family AT1G01720 73.179 3.96e-152 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele27g1838 NAM 9.8e-39 No_clan