Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1835 ATGTCAAAGTCTACATCTCTGGAACCGCCATTGTCCATTTATTCTTCACCTGGGACTAGGGAAACTAAACTGGCCGAAGAAATGGATGATCCAGAATCTACAATGACTACAGTTGCTAATTTTGTTGAGCAACTGCATGCCAACTTGTCTTCACCACTTGAGAAGGAATTTATCACAGCTCGTTTGCTAGGCATTGCCAGGGCAAGAAAGGATGCTAGAACACTTATTGGCTCTCATGCCCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAACGGAACCCCTCTGGCAAAAGTTAATGTTGCTGCCACTTTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCTCCTTTACTGTCACTTTTGAAGTCTGAAACCACAGAGGCAAGGAAGGCCGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGATGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACTTTATGGGATCAACTAAATCCCAAAAACAAACAAGACAAATTTGTGGAGGGTTTCATTACCGGGGCATTGAGAAATCTGTGTGGTGACAGAGACAGATACTGGAAGGCAACATTGGAAGCAGGGAGTGTGGATATTATTGTGGGTCTCTTGTCTTCAAAAAATGCTGTTGCTCAGTCAAATGCAGCTTCTCTGCTAGCACGACTGGTGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGAATCTGGTGCAGTCAATGCTTTACTTTGGCTTGTTGGTCGGGAAAATGATAGCTCTGTCCGAGCAAGTGCTGCTGATGCTCTAGAGGCCCTTTCATCAAAGTCAACTAAAGCAAAGAAAGTCATTGTCAGTGCAGATGGTGTTTCAATTCTTATTGGGGCTATAGTTGCTCCCTCTAAAGAGTGTATGCAAGAAAACGGTCAGGATCTGCAGCAGCATGCAACTCATGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATACTATATCTCGGAGAACTCTCCCATTCTCCTCTCCTAGCTGCACCAGTTGGTGATATAATTGGAGCTCTTGCTTACACACTGATGGTGTTTGAGGACAAACATGATGTTGATGGGGAGCCTTTTGATGCCACTCAAATAGAGGATATTCTAGTGACACTATTAAAGCCTCGAAATAACAAGCAGATTCAAGAACGAGTACTAGAGGCCATGGCTAGTCTATATGGAAACACCTATCTCTCGAAATGGGTTGAGCATGCAGATTCAAAAAAGTTTCTTATTGGACTCATTACTATGGCTGCTGCTGATGTGCAGGACTACCTTATACTCTCCTTGACAAGCTTGTGCTGTGATAGGGTAGGAATATGGGAGGCCATAAACAAAAGAGAAGGCATCCAGTTACTCATCTCAATGCTGGGACTATCCAGTGAGCAGCACCAAGAGTATGCAGTTCAGTTGCTATCAATTTTAATTGATCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAGAGACAGGATCGCAGAAGGCTAGAGAGGAAGCTGCTCATATTCTGTGGAACCTGTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGATTGGTGGACCAAGAGGACAAGAAGCTTCTGCCATGGCACTCATTAAGCTTGAGCGTAGAGCTGATTCTGCTACCATTAATCAATTGTTGGCATTGCTTCTTGGGGAAACTACAGGCTCAAAGGTCCATATAATTCGAGTCTTAGGTCATGTACTTACTATGGCTTCACAGATGGACCTCCTGCAGAAGGGTTCTGCAGCTAATAAGGGGTTGAGATCTCTAGTTCAGGTTCTCAACTTATCAGATGAAGAAACCCAGCAACAAGCGGCTTCTGTCCTAGCTGATTTGTTCAGTGCCAGACAAGACATCTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCCTTGCATGAAGCTTTTGACCAGCAAAAATCAAGTTGTTGCAACTCAGTCAGCTCGAGCAATGGGTGCTCTGTATCGTCCAACACACAGCAGATCTGCCAATAAGATGCCTTATATTGGAGTGGAGGATGTCAAGCCACTAATTAAATTGGCCAAAACTTCCTCCATTGATGCCGCTGAAACTGCAGTTGCTGCGCTGGCCAATCTTCTCTTTGATACCTCTATTGCTGCTGAAGCTTTGGCAGGAGATCTTATTTCATCTTTAACAAGAGTTCTGGCAGAAGGAACTCTGCAAGGTAAACAAAATGCGTCACGTGCACTTCATCAGCTACTGAAGCATTTTCCTGTTGGTGATGTCCTCAAGGGAGATGCTCAGTACCGTGTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAATATGGATGGAACTGATGCTGCCAATGCTTTAGAAGTAGTGGCACTGCTTGCCCGGACAAAACAGGGCGACAATTTCACTTACACTCCATGGTCTGCATTTGCAGAAACACCATCCAATTTAGAACCTCTTGTACGCTTCCTGGCTGAGGGGCCTCCCCAAGTGCAAGATAAGGCAATTGAAATTCTGTCTAGACTTTGTGGTGATCAATTAGTTGTTCTTGGGGATTTGTTGGCTGCTATGTCTAGATCCATTAGTTCATTAGCTGATAGAATGATGAACTCCTCCAGTTTAGAAGTCAAAGTTGGAGGGGCTTCCTTACTTATTTGTGTTGCAAAGGAGCATAAAGAGCTGTCAATGGATGTACTTGGCACTTCTGGGGATCTAAAACCATTAATATATGCTTTAGTAGATATGCTGAAGCAGAACTCTAGCTGTTCATTAGAGGTTGAAGGAGAAACTTCCAGAAATTTTATGGTGAAGAGTGCATTTCAGGAAGTTGATCTTGATATTCTTGATCTGGCCAAAGTCTCGGGTGTTACTGTTGCCTTGTGGTTACTCTCGATTATTGCTTCTTCCGATATAAAGAACAAACTCACAATTATGGAAGCTGGTGGACTTGAGTCTCTCTCTGAAAAGCTTGCAAACCATACTTCCAATCCACAGGCAGAATTTGAGGATACAGAAGGAATATGGATAAGTGGCTTGCTCCTGGCCATTTTGTTTAAAGACAGAATTGTTGTTCTATCTCCAGTAACAATGCACATTTTACCTTCTCTCACTCATTTACTCCGGTCCGAAGAAGTGGCATATAAATATTTTTCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAAGGGAATAGCTCTTGCTATCGCAAACTCTGGTGCTGTTGCCGGATTGATTTCTATGATTGGCTATATAGAGTCAGATATACCAAACATTGTTGCTTTATCAGATGAATTTTCACTGGTGCGAAATCCTGATCAAGTAGTTTTGAATCACCTTTTTGAAATTGAAGATATAAGATCGGGATCTACTGCACGAAAATCTATACCTCTCTTGGTGGATCTATTGAGACCAATTCCAGAAAGGCCTTGTGCTCCACCAGTTGCTGTTGAACTGTTGACACGCATTGCAGATGGAAGTGATACAAACAAAATAATCATGGCTGAAGTAGGCGCTTTGGAAGCTTTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCAGTATTTCTGAGTTATTAAGAATACTATTTTGCAATTCTGACCTTATTAAACATGAAGCATCAGCAAGTTCTCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTTGTGAACTTTTTGATGCCGAGAGTATTAGAAACTCAGAATTAGCTAAACAGACCATTCAGCCTTTGGTTGACATGCTTAATACAACATCAGGTAGCGAGCAGGAGGCTGCTTTGATTGCATTAATCAGATTAACGTATGGAAATTCTTCAAAAGCATCTTTTTTTGCTGATGTAGAAGGGAACCCACTTCAGAGTTTATACCAGATATTGTCTTCCGCTTCATCCCTGGAACTGAAGAGCAATGCTGCGCAACTCTGCTTTGTCCTTTTCTCTAGCAGGATTATTAGAGCTGATCCACTTGCCTCAGAATTCTTAGAACCCCTTGTTTCACTGCTGCAGTCTGATTCTGGCCTGGCAATAGAAGCTGGGGTTTTTGCTTTTGAGAGATTACTGGAAGATGAACAACACGTGGAGCTTGCAGTAGCCTGCAATGTTGTAAATCTCCTTGTTAGTTTGGTTGTGGGTTCCAACTATCAACGGATTGATGCTACCATATCTGCTCTCATCAAATTGGGCAAAGATAGGACGCCATGCAAACTAGACATGGTTAAAGCTGGCATTATTGATAATTGTCTGAAGTTACTTGAATTTGCACCTAGCTCACTGTGCTCCACAATTGCTGAACTATTCCGCATTTTAACAAATAGTAGTGCAATTGCTAGAAGTTCGGAAGCCGCAGAAATTGTAGAACCCCTTTTTAAAGTTTTGCTCCGTTTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATATTGGAGAAGCCACAAAGTCTTGCAACCTTAAAACTAACTCCTAGCCAAGTTATTGAGCCCTTGATATCATTCCTGGAATCCCCATCCCAAGCTATTCAGCAGCTGGGCACTGAACTGTTGTCTCATCTTCTTGCGCAGGAACATTTTCAGCAAGATATTAAAACAAAGAATGCTGTCGTTCCTCTTGTTCAACTTGCAGGAATTGGAATACTGAACTTACAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATAATCCTCAGCCACTACATGCACTCTGGGAATCAGCTGCTTTAGTTCTTTCTAATGTACTATGTTCCAATGCTGATTATTATTTTAAAGTTCCTGTTGTAGTTCTTGTAAAACTGTTGCACTCAACGGTTGAGAGTACCATTAGTGTAGCTCTTAAAGGCCTAATGATTCATGAAAGAAGTGATGCTTCAAGCTCTGAACAGATGATGGAAGCTGAAGCTATAGATGTTCTGTTAGACCTTTTAAGATCTCATCAATGTGAAGAAGCATCTGGCGGATTACTTGAAGCTCTATTCAACAATGTGAAAATAAGAGAGATGAAGGCATCTAAGTATGCAATAGCACCGTTATCTCAGTATCTGTTAGATCCGCAGACCAGATCACCGTCTAGCAAACTTCTTGTTGCTTTAGCTTTGGGAAATATTTCCCAGCATGAAGGACATGCTAGAGCTAGTGGTTCTGTTTCTGCTTGTCGTGCATTGGTAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGGTGATGGTTGCAATCTGTGCGTTGCAAAACTTTGTCATGAACAGCAGGACTAATAGGCGAGCAGTTGCAGAAGCTGGTGGCATACTGGTGATTCAGGAATTGCTACTGTCTACAAATCCAGAAGTTGCAGGACAAGCAGCATTGCTGATCCGATTTTTATTTTCTACTCACACACTACAAGAGTATGTGTCAAATGAGCTGATCAGATCTCTGACAGCTGCACTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACTCTGCATGTCATATTCTCGAACTTCCCTAAGCTCCACGTGTCTGAAGCAGCGACTCTTTGCATTCCTCATTTGGTAGGGGCACTCAAATCTGGTAGTGAAGGGGCTCAAGACTCTGTACTAGACACCTTGTGCTTGCTAAGACATTCTTGGTCAACCATGCCAATTGATATATCAAAGTCTCAGTCTATGATCGCTGCTGAAGCCATTCCCATCCTGCAAATGCTCATGAAAACCTGTCCCCCAAATTTCCATGAGAGAGCAGACAGTCTTCTGCATTGCTTACCAGGTTGTTTGACTGTCACCATTAAAAGTGGAAACAACCTCAAGCAAACTATGGGAAGTACAAATGCATATTGCCAGTTAACAATAGGCAATGGTCCCCCCAAACTAACCAAGGTTGTGAGTCACAGTATTTCGCCTGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCAAAGGGCCAGAAGTTGTACATCATATGCAAAAGCAAGAATACTTTTGGCAAGGCAACCCTTGGAAGGGTTACAATACAAATTGATAAAGTGGTAAACGAGGGAGTATACAGTGGAATGTTCAGTCTTAATCACGACAGAAACAAAGATGGTTCTTCCCGAACTCTTGAAATTGAGATCATATGGTCCAACAGGATCTCTGATGACGACCTTTGA 6402 0.4239 MSKSTSLEPPLSIYSSPGTRETKLAEEMDDPESTMTTVANFVEQLHANLSSPLEKEFITARLLGIARARKDARTLIGSHAQAMPLFISILRNGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSETTEARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDKFVEGFITGALRNLCGDRDRYWKATLEAGSVDIIVGLLSSKNAVAQSNAASLLARLVLAFSDSIPKVIESGAVNALLWLVGRENDSSVRASAADALEALSSKSTKAKKVIVSADGVSILIGAIVAPSKECMQENGQDLQQHATHALANICGGMSSLILYLGELSHSPLLAAPVGDIIGALAYTLMVFEDKHDVDGEPFDATQIEDILVTLLKPRNNKQIQERVLEAMASLYGNTYLSKWVEHADSKKFLIGLITMAAADVQDYLILSLTSLCCDRVGIWEAINKREGIQLLISMLGLSSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLETGSQKAREEAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKIGGPRGQEASAMALIKLERRADSATINQLLALLLGETTGSKVHIIRVLGHVLTMASQMDLLQKGSAANKGLRSLVQVLNLSDEETQQQAASVLADLFSARQDICDSLLATDEIVLPCMKLLTSKNQVVATQSARAMGALYRPTHSRSANKMPYIGVEDVKPLIKLAKTSSIDAAETAVAALANLLFDTSIAAEALAGDLISSLTRVLAEGTLQGKQNASRALHQLLKHFPVGDVLKGDAQYRVTVLALVGSLSAMNMDGTDAANALEVVALLARTKQGDNFTYTPWSAFAETPSNLEPLVRFLAEGPPQVQDKAIEILSRLCGDQLVVLGDLLAAMSRSISSLADRMMNSSSLEVKVGGASLLICVAKEHKELSMDVLGTSGDLKPLIYALVDMLKQNSSCSLEVEGETSRNFMVKSAFQEVDLDILDLAKVSGVTVALWLLSIIASSDIKNKLTIMEAGGLESLSEKLANHTSNPQAEFEDTEGIWISGLLLAILFKDRIVVLSPVTMHILPSLTHLLRSEEVAYKYFSAQAMASLVCNGDKGIALAIANSGAVAGLISMIGYIESDIPNIVALSDEFSLVRNPDQVVLNHLFEIEDIRSGSTARKSIPLLVDLLRPIPERPCAPPVAVELLTRIADGSDTNKIIMAEVGALEALTKYLSLSPQDSTEASISELLRILFCNSDLIKHEASASSLNQLIAVLRLGSRNARYSAARALCELFDAESIRNSELAKQTIQPLVDMLNTTSGSEQEAALIALIRLTYGNSSKASFFADVEGNPLQSLYQILSSASSLELKSNAAQLCFVLFSSRIIRADPLASEFLEPLVSLLQSDSGLAIEAGVFAFERLLEDEQHVELAVACNVVNLLVSLVVGSNYQRIDATISALIKLGKDRTPCKLDMVKAGIIDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSEAAEIVEPLFKVLLRLDFDLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDIKTKNAVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFELAKVIIQDNPQPLHALWESAALVLSNVLCSNADYYFKVPVVVLVKLLHSTVESTISVALKGLMIHERSDASSSEQMMEAEAIDVLLDLLRSHQCEEASGGLLEALFNNVKIREMKASKYAIAPLSQYLLDPQTRSPSSKLLVALALGNISQHEGHARASGSVSACRALVSLLEDQPTEEMVMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSTNPEVAGQAALLIRFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFSNFPKLHVSEAATLCIPHLVGALKSGSEGAQDSVLDTLCLLRHSWSTMPIDISKSQSMIAAEAIPILQMLMKTCPPNFHERADSLLHCLPGCLTVTIKSGNNLKQTMGSTNAYCQLTIGNGPPKLTKVVSHSISPEWKEGFTWAFDVPPKGQKLYIICKSKNTFGKATLGRVTIQIDKVVNEGVYSGMFSLNHDRNKDGSSRTLEIEIIWSNRISDDDL 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1835 2133 Pfam Armadillo/beta-catenin-like repeat 505 540 IPR000225 GO:0005515
Lele27g1835 2133 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 16 2127 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele27g1835 2133 SUPERFAMILY ARM repeat 443 793 IPR016024 -
Lele27g1835 2133 CDD C2 2007 2097 - -
Lele27g1835 2133 SUPERFAMILY ARM repeat 1611 2003 IPR016024 -
Lele27g1835 2133 SUPERFAMILY ARM repeat 1192 1543 IPR016024 -
Lele27g1835 2133 Gene3D - 822 1340 IPR011989 -
Lele27g1835 2133 Gene3D - 1608 2005 IPR011989 -
Lele27g1835 2133 ProSiteProfiles C2 domain profile. 1986 2103 IPR000008 -
Lele27g1835 2133 MobiDBLite consensus disorder prediction 1 19 - -
Lele27g1835 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 554 IPR000225 GO:0005515
Lele27g1835 2133 Gene3D - 1342 1604 IPR011989 -
Lele27g1835 2133 Gene3D - 37 344 IPR011989 -
Lele27g1835 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1800 1843 IPR000225 GO:0005515
Lele27g1835 2133 SUPERFAMILY ARM repeat 71 307 IPR016024 -
Lele27g1835 2133 MobiDBLite consensus disorder prediction 1 23 - -
Lele27g1835 2133 Gene3D C2 domain 2006 2131 IPR035892 -
Lele27g1835 2133 Gene3D - 631 799 IPR011989 -
Lele27g1835 2133 SUPERFAMILY ARM repeat 855 1126 IPR016024 -
Lele27g1835 2133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2004 2109 IPR035892 -
Lele27g1835 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 298 IPR000225 GO:0005515
Lele27g1835 2133 SMART C2_3c 2006 2102 IPR000008 -
Lele27g1835 2133 Pfam C2 domain 2006 2105 IPR000008 -
Lele27g1835 2133 Gene3D - 362 629 IPR011989 -
Lele27g1835 2133 SMART arm_5 1286 1327 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 623 662 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1583 1623 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 287 335 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1832 1872 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 710 750 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1541 1582 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 244 285 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1744 1788 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 111 151 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 751 791 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1456 1496 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 543 583 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 457 499 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 1204 1244 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 501 541 IPR000225 GO:0005515
Lele27g1835 2133 SMART arm_5 201 242 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1835 Lele-ChrLele27 23224483 23232977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1835 472 705 U-box Gene Family AT2G23140 29.339 1.96e-11 67.4