Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1825 ATGGCGGATTCAAGGGTGGAGACAATATCAAGACTAGCACAATGGAAAATTGACAACTTCGGACCTTGCTCCTACAAGAAATCCGATCCTTTCAAGGTCGGACTCTGGAACTGGTATTTATCTATAGAGAGGAATAGGTATCTGTACATACATCTATTTCCTGAGCCTTCCCGGGTCTCTAAGGAACACCCGCCAATTGCTCGATTCATTCTCCGAGTTTCTAATACCGGCTCTTCCCGCAAATTCTACATTTCTCCTGTTCATGAACGACTACTTAGAACATGTGATGACTTTGTCTGGCCCGTGGATACTACATTTGTTGGTCGTTTCATTATTGACGTTGAATTCCTTGACCTGAAGATCTGTCCTCTGAATGGCGGAGAAGCTAGTTCTATATGGCCTTCTGATGGAAAATTGCAATCTGTTGCCGCGCAAAGTTCCCTCCAATGCCTCTCTCGCATGCTTGATGAGGGCATACATGCTGATCTTACCATTAACACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAATCATCTACGATCCACATAGAAGACATGTCACTTGAATCTTGCATGGCTCTTCTAAGTTACTTATATGGCACAATAAAGCAAGAAGATTTCTGGAAGCACCGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTAAAGATACCTGTGAGGAAAGCTTATTGGAAGATCTTAACTCAGGAAATGTCCTTGAGAGGCTACACGAGGCATGGCTTTATCAGCTGAACAAGTTGAAGAAAGGGTGCTTGACCTTCCTATTTGATTTTGGTAAGATATATGACGTACGAGAAGAAATAAATAACTTCTTCAGGCATGCAGATAGGGAGCTGATGATCGAGATGTTTCAGGAGGTGCTTACATTTTGGAAACCAGTATAG 981 0.4261 MADSRVETISRLAQWKIDNFGPCSYKKSDPFKVGLWNWYLSIERNRYLYIHLFPEPSRVSKEHPPIARFILRVSNTGSSRKFYISPVHERLLRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEASSIWPSDGKLQSVAAQSSLQCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDFWKHRLALLGAANKYDITGLKDTCEESLLEDLNSGNVLERLHEAWLYQLNKLKKGCLTFLFDFGKIYDVREEINNFFRHADRELMIEMFQEVLTFWKPV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1825 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Lele27g1825 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Lele27g1825 326 SUPERFAMILY POZ domain 144 257 IPR011333 -
Lele27g1825 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Lele27g1825 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Lele27g1825 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Lele27g1825 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Lele27g1825 326 SUPERFAMILY TRAF domain-like 12 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1825 Lele-ChrLele27 23159678 23161816 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele27g1825 BTB 4.9e-23 CL0033