Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1804 ATGGCGAAGGATTTGAAACTATGCACTCAATCAAGGCTATTGCTCCTACCATTCGCGCTTTCCCTTTTCTTCCTTGCGAGTCGCCTTCTACCTCGAGCAGAGGCCATATGGCTAAACATTCCCAGCTCCGGAACCAAGTGCGTATCTGAGGAAATCCAATCTAACGTCGTCGTGTTGGCCGATTACGTTGTGGTGGCCGATCATGCTGAAGCTCAGCACCTTCCTACTATTTCGGTCAAGGTAACATCTCCTTATGGAAACAATCTTCACCACAATGAAAACGTTACCCATGGTCAATTTGCATTTACAACTACGGAGAGTGGGAACTACTTGGCTTGTTTCTGGGTGGATGGTCAACATCAAGAAACAAGTCTCAACCTTGAATGGAAAACTGGAATTTCTGCCAAGAATTGGGAAACAGTTGCGAGGAAGGAAAAGATTGAGGCAAGTTTTTCCAATGAGTTATTTCCTCCAACCTCCATAATTTCAATTCATACAATCCTGTCATCTGCCGATAATCGCGGTTCTCTTCTGCATTTTGAAAGTGTCTTTTGTGGACATTGGCACAGGGAAGCAGAGATGAGGGAAGTCAGTGAAAAAACTAATGCTAGAGTGGCTTGGTTAAGCATAATGTCTCTTGGAGTTTGCATTTCGGTTTCAGTTTTTCAGGTTTGGTACCTGAAGCGCTACTTTCAGAAGAAGAAGCTCATATAG 714 0.4398 MAKDLKLCTQSRLLLLPFALSLFFLASRLLPRAEAIWLNIPSSGTKCVSEEIQSNVVVLADYVVVADHAEAQHLPTISVKVTSPYGNNLHHNENVTHGQFAFTTTESGNYLACFWVDGQHQETSLNLEWKTGISAKNWETVARKEKIEASFSNELFPPTSIISIHTILSSADNRGSLLHFESVFCGHWHREAEMREVSEKTNARVAWLSIMSLGVCISVSVFQVWYLKRYFQKKKLI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1804 237 SMART EMP24_GP25L_2 35 232 IPR009038 -
Lele27g1804 237 ProSiteProfiles GOLD domain profile. 45 131 IPR009038 -
Lele27g1804 237 Pfam emp24/gp25L/p24 family/GOLD 37 232 IPR009038 -
Lele27g1804 237 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 234 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1804 Lele-ChrLele27 23036818 23039336 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0284 25 1701222 1709191 Lele27g1804 27 23036818 23039336 hybridization
Lele26g0295 26 1742623 1745180 Lele27g1804 27 23036818 23039336 hybridization