Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1802 ATGAGGAGCTGGGGATCATGGGTTTCGGAGATTAGAGCTCCTAACCAGAAGACAAGAATATGGCTGGGCTCTTATTCAACTCCTGAGGCAGCGGCCAGAGCCTATGATGCTGCACTTCTTTGCCTGAGAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTTCTTCCTCCTCCTTCTCTCACTTCAATATTCCCCAGGACACTCTCCTGTCACCAAAGTCAATCCAAAGAGTAGCTGCAGCTGCTGCTAATTCTTCTGCTGATAATGCCACCACCCCACCTTCCTCATCAGTCTCATCTTCTTCAATGGTTTCCTCTCCTTCTGATCTAGTTGATGATGATGCTTCCTTAATCTCATCCTTTGACGCATTCTCTGGCTATGATCACCCAGATGAATCAATGGCTGCCATGGAACCTTTGTACGGCCTTGAAGGGCTACCATCTCCTAAATATGTTGATCAAATGCTCACGGGTTCTTCTTTTGATGACTTTTATTCACACCAGGTGCTCGATGATCTCTACGAAGAAAGCAACATCAGCTTGTGGAGCTTCTACTGA 561 0.4652 MRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLRGSSANLNFPSSSSSSSFSHFNIPQDTLLSPKSIQRVAAAAANSSADNATTPPSSSVSSSSMVSSPSDLVDDDASLISSFDAFSGYDHPDESMAAMEPLYGLEGLPSPKYVDQMLTGSSFDDFYSHQVLDDLYEESNISLWSFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1802 186 MobiDBLite consensus disorder prediction 82 108 - -
Lele27g1802 186 CDD AP2 1 52 IPR001471 GO:0003700|GO:0006355
Lele27g1802 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 122 - -
Lele27g1802 186 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Lele27g1802 186 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Lele27g1802 186 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Lele27g1802 186 FunFam ethylene-responsive transcription factor ERF014-like 1 54 - -
Lele27g1802 186 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Lele27g1802 186 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1802 Lele-ChrLele27 23027484 23028044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1802 1 185 AP2-EREBP Transcription Factor Family AT1G21910 48.969 8.10e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele27g1802 AP2 2.8e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0285 25 1713020 1713589 Lele27g1802 27 23027484 23028044 hybridization
Lele26g0297 26 1752566 1753228 Lele27g1802 27 23027484 23028044 hybridization