Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1793 ATGGAATCTATCTTTTACTTCTCTCTCATTTTTCTCCTCTTTTCTGTCGTATCTGCTAAAATTTTCTCGGAATCCATCAATCCAAACTTCACTGCCTCATATCTTCAGTTCATTGAGCGCTCTGGCACCTTCTTGTCATCCCGCAATGGAACATTCGAGGCTGCGATATTCAATCCTGGGGATCAACAATCCAGATTCTACCTGTGCGTCATCCATGTTGCATCCCGCACCATCATTTGGTCTGCTAATCGTGATGCTCCCATGTCAAATCCTGATACGATGATTCTGAGTGTCAAAGGGATCACTATTTTCGATAATCGCGGAAACGTCAAATGGTCAACCCCACCATTGAAATCACCAGTATCCTCATTACAACTCACTGAAACGGGCAATCTCGTCTTACATGATCGTTCCAATGGTTCTCTTTGGGAGAGTTTCCAACACCCAACAGACACAATTGTCATCGGACAGAGCTTACCTGTTGGGACATGGCTGTCAAGTTCGATATCAGGGGCTGACTTGTCAACTGGGGATTACAACTTGAGTATCACTCCATCTGATGCAATTCTTCAGTGGCATGGACAAACATACTGGAGGTTGTCGATGGCCGCAAAAGCCTTTCAGGATTCAACTCATACGGTGGAATCCATGGCTATAAACAGAACAGCTCTGAATCTCTATGGAAGTAATGGAACAGTGACTGTGTTTAGGGTGGTCGTGCCCAGGGCTGATTTCCCAATTGCCAAATTAGCTGTTAACGGCCAGTTTACCGTCCAAAGCTTTTCCGGTACTGGATGGGTCCAGGAATTTGTGGGGCCAGATGATGGTTGTGAAACTCCATTTTTTTGTGGCAGATTAGGATTATGTACTCAGGGCGCTGCGTCCTCTGCACCCACTTGTTCTTGTCCCCCAAACTCCCATGCAGGCTCAAGTAATGCTCGGGGTTGTGTACCTAGCAATAGTTCTTATTCTTTGCCATCTGCGTGTAATTCATCTGGTTATGATAGTACACCAAATTCTTCAGCTGTTTCATATTTGAAGCTCGGGGAGGGTATGGAGTACTTTGGAAATACATACTCTAACAGCGTAACATATGTAGTGAACTTAACTATTTGCCAAGATCTCTGTTCATGGAATTGTTCTTGCTTGGGATTTTTCTTTGAAAATTCGTCTGGTTCCTGCTACATGATTGAAAATGAGTTGGGTTCTGTTATGTCAAGTAGTGGTAGGGGTGCAGGTAAGTCGTTGGGCTACATCAAAGTTATTGTTGCATCTGCGACTGATATTGATGAACCCACTTCTAAAGAAGAGGGGCTTCCTGTGGCTGCTCTGGTGCTAATACCTCTTACTGGATTCATTATTGCTTTGGGTCTCGGTTTCCTCTGGCTTAGAAGATTTAGAATCTCCAGGACAAAAGAGATAAAATTAGGCAAGTTCAAATCACATTCTTCAGAGGACTTGGAGGCCTTCTATATTCCAGGTTTACCTAAAAGGTTTGATTATGAGGAACTTGTGGAGGCTACTGATAATTTCAAGACTCTAATCGGTTCGGGTGGATTTGGTACGGTGTTCAAGGGGCAACTGCCTGATAAGACCGTCGTGGCGGTAAAGAAAATAGTAAATGTGGGAAATCAAGGGAAAAAGGATTTCTGCACTGAGATTGCAATCATTGGAAATATCCACCACGTTAATTTGGTCAAACTGAAAGGCTTCTGTGCCGAAGGAAGACAACGTTTGTTGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGCACCCTCTTTGGAGGCGGACCAGCCATAGAATGGCAAGAGAGGTTTGATATAGCACTTGGAACAGCGCGTGGACTTGCCTATCTGCACGGTGGCTGCGAGCAAAAGATCATTCATTGTGATATCAAACCTGAGAATATTCTTTTGCATGATCAGTTTCAGGCTAAGATATCTGATTTTGGACTCTCAAAACTCCTCAGCCCCGAGCAGTCTGGTTTATTCACAACAATGAGAGGCACACGCGGTTATCTAGCTCCAGAGTGGCTTACCAACTCGGCAATCACAGAGAAGACTGATGTTTATAGTTTTGGAATGGTGCTGCTGGAGCTAGCGAGTGGGAGAAAAAACTGTTCTTTGGGGTCACAAAGCCCTAGCAAGGACGAGAGTATAAGTGGCAATTCAGGGACGTCATCGGTGACAGGACTGGTTTATTTTCCACTATATGCGTTAGAGATGCACGAGCAAGGTAGGTACCTGGAGTTGGCTGATCCAAGGCTAGAAGGGCGTGTTACAAATGAGGAGGTGGAGAAGCTAGTGCGTGTAGCATTGTGCTGTGCTCATGAAGAACCATCCCTGAGGCCAAATATGGCTGCTGTTGTTGGCATGTTGGAAGGTGGGACTCCACTGGCCCAGCCAAGGATTGAATCCTTGAACTTCTTGCGCTTTTATGGGCGTAGGTTTACAGAGGCTTCCATGATAGCCGAGGAAAAAACTGCTTCTCAACTGGCACAGAAACCTTCAAGTACAACAAGTGGTTCTCAAACAGCTTTTTCTTACATTTCCTCACATGATGTCTCAGGGCCTAGATAG 2583 0.4499 MESIFYFSLIFLLFSVVSAKIFSESINPNFTASYLQFIERSGTFLSSRNGTFEAAIFNPGDQQSRFYLCVIHVASRTIIWSANRDAPMSNPDTMILSVKGITIFDNRGNVKWSTPPLKSPVSSLQLTETGNLVLHDRSNGSLWESFQHPTDTIVIGQSLPVGTWLSSSISGADLSTGDYNLSITPSDAILQWHGQTYWRLSMAAKAFQDSTHTVESMAINRTALNLYGSNGTVTVFRVVVPRADFPIAKLAVNGQFTVQSFSGTGWVQEFVGPDDGCETPFFCGRLGLCTQGAASSAPTCSCPPNSHAGSSNARGCVPSNSSYSLPSACNSSGYDSTPNSSAVSYLKLGEGMEYFGNTYSNSVTYVVNLTICQDLCSWNCSCLGFFFENSSGSCYMIENELGSVMSSSGRGAGKSLGYIKVIVASATDIDEPTSKEEGLPVAALVLIPLTGFIIALGLGFLWLRRFRISRTKEIKLGKFKSHSSEDLEAFYIPGLPKRFDYEELVEATDNFKTLIGSGGFGTVFKGQLPDKTVVAVKKIVNVGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPAIEWQERFDIALGTARGLAYLHGGCEQKIIHCDIKPENILLHDQFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELASGRKNCSLGSQSPSKDESISGNSGTSSVTGLVYFPLYALEMHEQGRYLELADPRLEGRVTNEEVEKLVRVALCCAHEEPSLRPNMAAVVGMLEGGTPLAQPRIESLNFLRFYGRRFTEASMIAEEKTASQLAQKPSSTTSGSQTAFSYISSHDVSGPR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1793 860 Pfam Protein kinase domain 512 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1793 860 CDD B_lectin 41 149 IPR001480 -
Lele27g1793 860 SMART blect_4 36 149 IPR001480 -
Lele27g1793 860 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 42 147 - -
Lele27g1793 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lele27g1793 860 FunFam serine/threonine-protein kinase PBS1-like 478 584 - -
Lele27g1793 860 CDD STKc_IRAK 515 796 - -
Lele27g1793 860 MobiDBLite consensus disorder prediction 707 727 - -
Lele27g1793 860 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 200 IPR036426 -
Lele27g1793 860 SUPERFAMILY Protein kinase-like (PK-like) 487 794 IPR011009 -
Lele27g1793 860 MobiDBLite consensus disorder prediction 829 853 - -
Lele27g1793 860 ProSiteProfiles PAN/Apple domain profile. 329 423 IPR003609 -
Lele27g1793 860 ProSiteProfiles Protein kinase domain profile. 509 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1793 860 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 800 - -
Lele27g1793 860 Gene3D Transferase(Phosphotransferase) domain 1 585 802 - -
Lele27g1793 860 PIRSF SRK 1 847 IPR024171 GO:0004674
Lele27g1793 860 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Lele27g1793 860 MobiDBLite consensus disorder prediction 829 860 - -
Lele27g1793 860 Gene3D Phosphorylase Kinase; domain 1 481 584 - -
Lele27g1793 860 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Lele27g1793 860 FunFam Serine/threonine-protein kinase 585 802 - -
Lele27g1793 860 Pfam D-mannose binding lectin 77 159 IPR001480 -
Lele27g1793 860 SMART serkin_6 509 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1793 860 Gene3D - 40 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1793 Lele-ChrLele27 22976224 22978806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1793 465 803 Receptor kinase-like Gene Family AT5G20050 40.616 5.28e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele27g1793 Pkinase 1.9e-49 CL0016