Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1787 ATGGGCATTTCTTGTTTGGCTCAGGCGACTTTCTTCTTTATTACAATGAGCAAACCCAGAATCCATAGGAAACCCACCAAGCAAGCCATTGCCGACCAGAACCAAAAGCAGCAGAAATCAGAGAAACAACCCTCTTGGGCAGTGGTAAGAGGTCTATTGACTTGTAGAAATGTTCAAACCCAGCCGCAGCAAATTCCTGAAGGGAAACAGCAACCAAAGAAGAAACAAGAACAGCGAAAGTTGCAGGAAGAAAGAGTCCCAGAAGATCAGAACGGCAAGAAATGCAAGAAGATGAAATGTTCAGGCTCGCTTTGTAATAATACCAATATTATGGCAAAGCCTGAAACGGGATGCCAGGATGCGCACAGCAAAAAGGCCTCACTGTCTGCATGTAGCAGCAGCAACAATGATTCTTCAAGCAGATCCATGAGAGCTCCTCCACGAGAACCCAACGCTGCCGTTTTAGCATCTTCTTCTTCACTGTCAGCATCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCCCTTCAGGAGACTCTCTGGTTGTTATGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCTCCAGAGACCCTTCTCTTCGGAGTAGCATTTGTTCATGCCCAGACTGTGGTGAGATCTTCACCAAAGCAGAAAGCTTGGAGCTTCACCAGGCTGTTAAACATGCAGTATCGGAACTGGGTCCCGAAGATACGAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTGAAGAAACAGTCCCCAGTCTGCAAAATAGATCGCATCCTCAAGGTCCACAACACGCAGAAGACGATTTCCAGATTCGAAGAATATAGAGACTCCATAAAAGCCAAAGCCACAAAACTCCCCAAGAAACACCCACGTTGCATAGCAGACGGCAACGAGCTGCTCAGGTTTCACGCCACCACCTTCGTTTGCTCTCTGGGCCTAAACAGCTCGTCCAACCTCTGCAACTCAATACCTCAGTGCAACGTTTGCAACATAATCAAGAACGGGTTTAAGGTGACCGCAGGAACGAACGGAGGAAACGACGGGAAGGGAATATTGACGACGGCGACGAGCGGGAAGGCCCACGACAAAGCGGTGGTTTCAGCGGACGATAAGAACGACACTAGGGCGATGCTAGTTTGTCGGGTAATATCTGGCAGGGTGAAGAAGAACATGGAAGGAAGTATGGAGGAATATGATTCGATGGGAGGGGGTGTCGGGGCGTATTCTAATTTGGACGAGTTGTATGTGTTGAATCCAAGAGCTATATTGCCTTGTTTTGTTGTGATCTACAGAGGATTTTGA 1329 0.4748 MGISCLAQATFFFITMSKPRIHRKPTKQAIADQNQKQQKSEKQPSWAVVRGLLTCRNVQTQPQQIPEGKQQPKKKQEQRKLQEERVPEDQNGKKCKKMKCSGSLCNNTNIMAKPETGCQDAHSKKASLSACSSSNNDSSSRSMRAPPREPNAAVLASSSSLSASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFSRDPSLRSSICSCPDCGEIFTKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISRFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHATTFVCSLGLNSSSNLCNSIPQCNVCNIIKNGFKVTAGTNGGNDGKGILTTATSGKAHDKAVVSADDKNDTRAMLVCRVISGRVKKNMEGSMEEYDSMGGGVGAYSNLDELYVLNPRAILPCFVVIYRGF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1787 442 MobiDBLite consensus disorder prediction 70 96 - -
Lele27g1787 442 MobiDBLite consensus disorder prediction 59 97 - -
Lele27g1787 442 Gene3D - 232 440 - -
Lele27g1787 442 ProSitePatterns Zinc finger C2H2 type domain signature. 208 231 IPR013087 -
Lele27g1787 442 MobiDBLite consensus disorder prediction 129 171 - -
Lele27g1787 442 MobiDBLite consensus disorder prediction 22 45 - -
Lele27g1787 442 ProSiteProfiles Zinc finger C2H2 type domain profile. 208 236 IPR013087 -
Lele27g1787 442 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 97 439 - -
Lele27g1787 442 MobiDBLite consensus disorder prediction 129 145 - -
Lele27g1787 442 MobiDBLite consensus disorder prediction 153 171 - -
Lele27g1787 442 MobiDBLite consensus disorder prediction 28 44 - -
Lele27g1787 442 SUPERFAMILY ADP-ribosylation 233 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1787 Lele-ChrLele27 22954378 22957337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1787 173 440 C2H2 Transcription Factor Family AT1G75710 54.266 2.28e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele27g1787 None None None