Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1781 ATGGCGGCTTCCATCGACAGCCGTCAATACGCCGGCCCTTTAAACGCCGTCGCTCGTTCCTTCAACGTCTCCCCTCACTTCAACTTCCCTCCCAATCCCAGGAGATTCGAACCCTTCCAAAAGGACCTGGATTCCTCGAGCGAAGATGAGAACGACGCCAACGAGTTGAACGACCTAATACGAAAGGCTAGCTCCCAAGTGGAGGCGTCCATCTTTGATCCCCGCGATGACGGAACCGCCGATTGCTGGATCCAACGCAACTCTTCCATGGTCCGCCTCACAGGGAAACACCCCTTCAACTCGGAGCCACCCCTCACCCGCCTCATGCACCACGGCTTCATCACCCCCGTCCCGCTCCACTACGTCCGCAACCACGGAGCCGTCCCTCATGCTCGCTGGGATGACTGGACCATCGAGGTTTGTGGCCTCGTGAAACGCCCCGCCAAATTCACCGTGGACCAACTGGTCAACGAGTTCCCCAGCCGTGAGTTCCCGGTCACGCTGGTGTGCGCCGGAAATAGAAGGAAAGAACAAAACATGGTGAAACAGAGCATCGGTTTTAACTGGGGTGCGGCTGGGGTTTCCACTTCGGTATGGAAAGGGGTGCCGTTAAGGTACTTGCTCAAGAGGTGCGGGATCTATAACCGGGCCAAAAGAGCATTACATGTGTGCTTCGAGGGAGCCGAGGATCTGCCAGGTGGCGGTGGGTCCAAGTACGGGACAAGCATCAATAGAGAGTTTGCAATGGATCCGGCTCGCGACATCATCATCGCTTATATGCAAAACGGAGAGCAATTGGCACCGGATCACGGGTTTCCGGTGAGGATGATCATACCGGGTTTCATTGGGGGCCGCATGGTCAAGTGGCTCAAGCGTATCATTGTAACTCCGCAAGAATCGACCAACCATTACCATTACAAGGACAACAGAGTACTTCCCTCCCATGTGGATGCCGAGCTCGCCAATGCTGAAGCTTGGTGGTACAAGCCAGAGTATATAATCAACGAGCTCAACATAAACTCCGTGATAACCACGCCGTGTCACGAGGAGATCTTGCCCATAAACTCCTGGACTACTCAGAGGCCGTATGTGTTGAGGGGCTATTCATATTCCGGGGGAGGGAGAAAAGTTACACGTGTGGAGTTGACAATGAACGGCGGGGAAACGTGGTTAGTGGCCACGCTGGACCACCCAGAGAAGCCAAACAAGTACGGTAAATACTGGTGCTGGTGTTTCTGGTCTCTAGAGGTGGAGGTGTTGGACCTTCTGGGAGCCAAGGAAATCGCGGTTCGAGCATGGGACGAGGCCCTCAACACCCAATCCGAGAAGCTCATCTGGAATGTCATGGGCATGATGAACAATTGCTGGTTCAAAATAAAAACCAAAGTGTGCAGGCCCCACAAAGGGGAGATTGGAATTGTGTTTGAGCACCCGTCCTTACCAGGGAACCAATCTGGTGGATGGATGACCAAGGAAAGGCACCTTGAGCAGACGTCGGAGTCCAACCAGAGCCTCAAGAAGAGTGTCTCAACGCCCTTCATGAACACAGCCTCAGATATGTACTCCATCTCTGAAGTCAAAAAGCACACTTCCCCTGACTCTGCTTGGATCATCGTTCACGGCCACGACCCCGAGGACCGAACCGAGATGCACGTTGTGTATGCGAACCGGACAGAGGATGATATTCTGCTGAGAGAAGAGCTGGATGCGTGGGCTAAGAAGGATACGCGGTTCAAGGTGTGGTACGTGGTGCAAGAAAGCAAGAGGGAAGGGTGGGAATATAGTGTGGGTTTCATCACGGAGGATATCCTGAGGGAGCATGGCCCAGAGGCATCGGACGACACAGTGGCATTGGCTTGTGGGCCACCGCCCATGATTCAGTTCGCTGTTCAGCCCAATTTGGAGAAAATGGGGTATGACATCAAGAACAACTTACTTGTGTTTTAG 1947 0.5372 MAASIDSRQYAGPLNAVARSFNVSPHFNFPPNPRRFEPFQKDLDSSSEDENDANELNDLIRKASSQVEASIFDPRDDGTADCWIQRNSSMVRLTGKHPFNSEPPLTRLMHHGFITPVPLHYVRNHGAVPHARWDDWTIEVCGLVKRPAKFTVDQLVNEFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAGVSTSVWKGVPLRYLLKRCGIYNRAKRALHVCFEGAEDLPGGGGSKYGTSINREFAMDPARDIIIAYMQNGEQLAPDHGFPVRMIIPGFIGGRMVKWLKRIIVTPQESTNHYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTTQRPYVLRGYSYSGGGRKVTRVELTMNGGETWLVATLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQSEKLIWNVMGMMNNCWFKIKTKVCRPHKGEIGIVFEHPSLPGNQSGGWMTKERHLEQTSESNQSLKKSVSTPFMNTASDMYSISEVKKHTSPDSAWIIVHGHDPEDRTEMHVVYANRTEDDILLREELDAWAKKDTRFKVWYVVQESKREGWEYSVGFITEDILREHGPEASDDTVALACGPPPMIQFAVQPNLEKMGYDIKNNLLVF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1781 648 Pfam Oxidoreductase molybdopterin binding domain 125 304 IPR000572 -
Lele27g1781 648 MobiDBLite consensus disorder prediction 32 53 - -
Lele27g1781 648 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 542 642 IPR039261 -
Lele27g1781 648 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 142 177 IPR022407 GO:0043546
Lele27g1781 648 PANTHER SULFITE REDUCTASE 60 465 - -
Lele27g1781 648 SUPERFAMILY E set domains 336 463 IPR014756 -
Lele27g1781 648 Pfam Mo-co oxidoreductase dimerisation domain 332 463 IPR005066 GO:0016491|GO:0030151
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 91 105 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 365 379 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 166 177 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 177 189 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 334 346 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 444 457 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 250 266 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 192 207 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 379 391 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 431 443 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 267 280 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 283 296 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 113 129 IPR008335 GO:0016491
Lele27g1781 648 PRINTS Eukaryotic molybdopterin domain signature 406 416 IPR008335 GO:0016491
Lele27g1781 648 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 74 334 IPR036374 -
Lele27g1781 648 PRINTS Cytochrome B5 reductase signature 616 624 - -
Lele27g1781 648 PRINTS Cytochrome B5 reductase signature 560 571 - -
Lele27g1781 648 CDD cyt_b5_reduct_like 543 648 - -
Lele27g1781 648 Pfam Oxidoreductase NAD-binding domain 542 630 IPR001433 GO:0016491
Lele27g1781 648 FunFam Nitrate reductase 336 512 - -
Lele27g1781 648 Gene3D - 95 335 IPR036374 -
Lele27g1781 648 FunFam Nitrate reductase 77 326 - -
Lele27g1781 648 CDD eukary_NR_Moco 76 461 - -
Lele27g1781 648 Gene3D - 512 648 IPR039261 -
Lele27g1781 648 Gene3D - 336 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1781 Lele-ChrLele27 22897034 22900408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1781 543 639 NADPH P450 reductases AT5G17770 41.837 7.50e-19 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0306 25 1841278 1844662 Lele27g1781 27 22897034 22900408 hybridization
Lele26g0317 26 1889571 1892597 Lele27g1781 27 22897034 22900408 hybridization