Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1780 ATGGGTCTGCCAGTCGGAAAGCACATATTCGTATGTGCTACCATTGAGGATAAGCTATCCATGCTACCATACACTCCAACTAGTAGCGTCGATGAAGTGGGGTATTTCGATCTAGTGGTCAATATTTACTTCAAAGGGGTACACCCCAAGTTCCCCAGCGGTGGGCTCATGTCACAGCACTTGGACTCGCTCCCTGTCGGCTCAGGTTCGGAAGTAAAGGGTCCACTCGGCCACATAGAGTACACTGATAGAGGTCAGCTTTTGGTTCATGGTAGGCACAAGTTTGCGAAGAGGCTATCCATGTTGGCCGGTGGTACCGGGATCATGCCCATTTATCAGGTGGCGCAAGCAATTCTTAAGGACCCGGAGGACCAAACCGGGATGCACGTTGTGTATGCGAACCGGACGGAGGATGATATATTGTTGAGAGAAGAGCTAGACGAGTGGGCTAAGATGGATGAGGGGTTCAAGGTGTGGTACGCGATGCAAGAAAGCAAGAGGGAAGGGTGGGGATATAGTGTGGGTTTCATCACGGAGGATATCCTGAGGGAGAATGCCCCCGAGGCATCCGATGACACTATGGCATTGACTTGTGGGCCACCACCCATGATCCAGTTCGCTGTGCGGCCTAATTTGGAGAAAATGGGGTATGACATCCACAACAACTTGGTTGTGTTTTAG 681 0.511 MGLPVGKHIFVCATIEDKLSMLPYTPTSSVDEVGYFDLVVNIYFKGVHPKFPSGGLMSQHLDSLPVGSGSEVKGPLGHIEYTDRGQLLVHGRHKFAKRLSMLAGGTGIMPIYQVAQAILKDPEDQTGMHVVYANRTEDDILLREELDEWAKMDEGFKVWYAMQESKREGWGYSVGFITEDILRENAPEASDDTMALTCGPPPMIQFAVRPNLEKMGYDIHNNLVVF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1780 226 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 1 82 IPR017927 GO:0016491
Lele27g1780 226 Gene3D Translation factors 1 76 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 138 149 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 1 12 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 22 29 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 194 202 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 67 81 - -
Lele27g1780 226 PRINTS Cytochrome B5 reductase signature 100 119 - -
Lele27g1780 226 Gene3D - 77 226 IPR039261 -
Lele27g1780 226 SUPERFAMILY Riboflavin synthase domain-like 2 83 IPR017938 -
Lele27g1780 226 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 72 221 IPR039261 -
Lele27g1780 226 Pfam Oxidoreductase FAD-binding domain 1 81 IPR008333 -
Lele27g1780 226 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 223 IPR001834 GO:0016491
Lele27g1780 226 Pfam Oxidoreductase NAD-binding domain 101 207 IPR001433 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 138 149 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 54 63 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 22 29 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 126 135 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 170 186 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 100 119 IPR001709 GO:0016491
Lele27g1780 226 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 194 202 IPR001709 GO:0016491
Lele27g1780 226 FunFam Nitrate reductase [NADH] 77 226 - -
Lele27g1780 226 CDD cyt_b5_reduct_like 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1780 Lele-ChrLele27 22889793 22890473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1780 1 218 NADPH P450 reductases AT5G17770 39.910 2.12e-43 145