Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1776 ATGCATCACCTACCTCGTCTATTCGGTCACAGAAAGCAAAAAAAGGGCATGGACCCGAATAAAGTCCGAAGAAAACCCCGGCTCGATCGCAGCAATGCTGTCAAGTACGCTGAGTATGATGCTGGGTCTTCTTCGTCGTCTCTAGACAACTCGTGTGGATCCCTCTACACTCGATCAACAGAGTTCTGTGATCAAACCAGCTTCCGAATTGCGGGAGCTGAGGGTGAGGTTGATCGCGTATGCAGAGATTTGGGGCTTTCAGGACCTGAAGACTTCTCCATCCCTGAGGCGCCGTGGGAGGCTATGAAAATTAGATCGTCTTCGGATATTACACCAAGTTCGAAGATGAACGAGTTAGAAGGTCAGGAGAATGAGGAATTACAAGACGAGAGTCCAGTCGTGGACGACTTAGGTAACAGAGTCGAAGAAAGGATTACAGTTAGATGTCTAGCTGAGCCAACTCAAGCTGAGCCTGCTGAGACCAGTGGGTGCTGCATGGCTGGTGGTTGTGTTTCCGGAACCAGTGTCGGAGTAGGTATTAAAGGAATCCGTCCACCGATGCTAAGGCCCCCGCCTGGGCCGAGGCATCCAGTTATTGATAACACTTGCTCTACTTGGGACATTTTAAGGGATTTAGCTCCGCAAGTTGAAAGGCAATCTTCAGGAAATTACGGGGAGTTGAACTCTTCCGATGATAACGAAGTAATACGCAGGGAAGCAGAGCAAGGAGAAGTAAAGAAAGAGGAAAAAGAAGAACCGGTAGTTGAAGGCAAGGTAAGTCCGAGAGGAGAAGAGGACGTTAATGCAACAAGGATTGCGGAGATCGTTTCTCAGTTTTCGGCATCGTGTTCGTTTACTACGTCAAATGAAGATGATTCTTCTAGCACTTTCACGGATCCTCCATCGAATAATATATCTCCCAACGGAAGATTCAGGCGCAGAATTACGAACTGGGAAAAGGGTGAACTTTTGGGACGTGGTTCGTTTGGGTCAGTCTATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCACTACTTGATCAAGATGACCAGGGAAGGCAAAGTATCTATTGCCTGGAGCAGGAAATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGGATCAATCAAAGCTGTACATTTTTCTTGAGCTTGTGACTAAAGGTTCCCTTGCAAATCTTTATCGGCGGTACAATCTTCGAGACTCCCAAGTATCTGCCTACACAAGACAGATTCTGCACGGTTTAAAGTACCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTAGATGCATATGGATCTGTCAAACTTTCAGATTTTGGATTGGCAAAGGCAACCAAACTGAATGATATTAAGTCGTGCAAGGGGACACCATTCTGGATGGCACCTGAGGTTGTGAAACGAAAGAATCAAGGTTATGGACTTCCGGCTGATATATGGAGTCTGGGGTGCACTGTGCTTGAGATGTTAACGGGCCAAATTCCATACTCTCATTTGGAATGTATGCAGGCTTTGTTTAGAATAGGAAAGGGTGAGCGCCCTCTTGTTCCTGACTCTCTTTCAAGAGATGCGCAAGATTTTATCCTGCAGTGTCTTCAAGTCAATCCTGATGATCGTCCCACTGCTGCTCAGCTTTTAAACCATCAATTTGTCCAAAGGCCTCTTTCCACATTCTCTGGCTCTGCGTCTCCTTGTATACCTGCCAGAAGGGGTTGA 1776 0.455 MHHLPRLFGHRKQKKGMDPNKVRRKPRLDRSNAVKYAEYDAGSSSSSLDNSCGSLYTRSTEFCDQTSFRIAGAEGEVDRVCRDLGLSGPEDFSIPEAPWEAMKIRSSSDITPSSKMNELEGQENEELQDESPVVDDLGNRVEERITVRCLAEPTQAEPAETSGCCMAGGCVSGTSVGVGIKGIRPPMLRPPPGPRHPVIDNTCSTWDILRDLAPQVERQSSGNYGELNSSDDNEVIRREAEQGEVKKEEKEEPVVEGKVSPRGEEDVNATRIAEIVSQFSASCSFTTSNEDDSSSTFTDPPSNNISPNGRFRRRITNWEKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQDDQGRQSIYCLEQEIALLSQFEHENIVQYYGTEMDQSKLYIFLELVTKGSLANLYRRYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDAYGSVKLSDFGLAKATKLNDIKSCKGTPFWMAPEVVKRKNQGYGLPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGKGERPLVPDSLSRDAQDFILQCLQVNPDDRPTAAQLLNHQFVQRPLSTFSGSASPCIPARRG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1776 591 ProSiteProfiles Protein kinase domain profile. 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1776 591 MobiDBLite consensus disorder prediction 287 310 - -
Lele27g1776 591 FunFam Mitogen-activated protein kinase 1, putative, expressed 316 583 - -
Lele27g1776 591 MobiDBLite consensus disorder prediction 240 265 - -
Lele27g1776 591 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 156 583 - -
Lele27g1776 591 Pfam Protein kinase domain 319 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1776 591 MobiDBLite consensus disorder prediction 1 21 - -
Lele27g1776 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Lele27g1776 591 SUPERFAMILY Protein kinase-like (PK-like) 293 576 IPR011009 -
Lele27g1776 591 MobiDBLite consensus disorder prediction 106 132 - -
Lele27g1776 591 MobiDBLite consensus disorder prediction 1 32 - -
Lele27g1776 591 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Lele27g1776 591 SMART serkin_6 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1776 591 Gene3D Transferase(Phosphotransferase) domain 1 315 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1776 Lele-ChrLele27 22867914 22876227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1776 9 575 MAP Kinase Kinase Kinase AT4G08500 49.672 3.72e-171 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele27g1776 Pkinase 4.4e-69 CL0016