Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1767 ATGCTGGCTTCCATCTGCATACCCCGCGCTGTTGCACAGCCCAACACAACTCTTCCCAGCTGGAAATCTTTCAGGGAGAGGAAAACTGGAATTTCCCGCAGTGTTCACATGGAAAACCTGCAGAACGAATATCTGTTTCCTGAGAAAGCACTTGCTTTGTCAACAGTTCAAGGTTACAGTGGATATGGACCAGAGCAAGGAAACGGGGAATTAAGGAAGGCAATAGCTGAAAGATTCTATCGGGATACACTCGTGAAGGAAAATGAGGTTTTTGTATCCGACGGCGCACAGTGCGACATCTCACGCATTCAGATGCTTCTAGCTTCTAGCTTGACGGTGGCTGTGCAGGACCCAACTTTTCCGGCGTATGTAGATTCGAGTGTAATTGTCGGCAGAGCAGGCAGGTTCCAAGCAGAAACCCAGAAGTACAGAAACATAGTGTACATGAAGTGTGTGCCGGAGAATAATTTCTTCCCAGACTTATCAGCTACTCCAAGAGCTGATGTTATTTTCTTCTGTTCTCCAAACAATCCAACCGGTAATGCAGCAACTCGGCAGCAGCTGAAGCAACTAGTGGATTTTGCAAAAGCAAACGGATCCATAATCATATATGACTCAGCATATGCTGCTTTCATATCTGATGAAAGCCCAAGATCAATATTTGAAATCCCAGGAGCCAAAGAGGTGGCAATTGAAATCTCATCATTCTCCAAATTTGCTGGTTTCACTGGGGTCCGCCTAGGCTGGACCGTTGTCCCGGAGCAATTATTGTACTCCAATGGATATCCTGTGATCAAGGATTATAATCGCCTAGTGTGCACCAGTTTCAATGGTGCTTCAAATATTGTTCAAGCTGGTGGACTCGCCTGCCTTTCTGATGAAGGTTTTCAGGCACTGGGTAAAGCTGTGAATTATTACAAGGAGAATGCGAAGATTCTGGTAGACACGTTTGAATCGCTTGGGCTGAAGGTGTATGGAGGCAAAAACGCACCTTACGTATGGGTGCACTTTCCAGGGAGAAAATCATGGGACGTGTTCAACAAGATTCTGCAGAGAGCGGACATAGTTACCGTCCCAGGGATAGGATTTGGACCTGGCGGCGAGGGGTTTATTAGAGTTAGTGCATTTGGTCAGAGGGACTGCATATTGGAAGCTTCAATGAGGCTGCGAAAATTTCTTTAG 1182 0.4619 MLASICIPRAVAQPNTTLPSWKSFRERKTGISRSVHMENLQNEYLFPEKALALSTVQGYSGYGPEQGNGELRKAIAERFYRDTLVKENEVFVSDGAQCDISRIQMLLASSLTVAVQDPTFPAYVDSSVIVGRAGRFQAETQKYRNIVYMKCVPENNFFPDLSATPRADVIFFCSPNNPTGNAATRQQLKQLVDFAKANGSIIIYDSAYAAFISDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEQLLYSNGYPVIKDYNRLVCTSFNGASNIVQAGGLACLSDEGFQALGKAVNYYKENAKILVDTFESLGLKVYGGKNAPYVWVHFPGRKSWDVFNKILQRADIVTVPGIGFGPGGEGFIRVSAFGQRDCILEASMRLRKFL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1767 393 FunFam LL-diaminopimelate aminotransferase, chloroplastic 39 293 - -
Lele27g1767 393 Gene3D - 49 293 IPR015421 GO:0003824
Lele27g1767 393 PANTHER AMINOTRANSFERASE 49 392 IPR019942 GO:0008483
Lele27g1767 393 Gene3D Aspartate Aminotransferase, domain 1 294 389 IPR015422 GO:0003824
Lele27g1767 393 SUPERFAMILY PLP-dependent transferases 52 389 IPR015424 -
Lele27g1767 393 CDD AAT_like 41 391 - -
Lele27g1767 393 Pfam Aminotransferase class I and II 54 375 IPR004839 GO:0009058|GO:0030170
Lele27g1767 393 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 52 391 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1767 Lele-ChrLele27 22810456 22813456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1767 27 22810456 22813456 Lele01g0366 01 2118531 2121885 CCT
Lele27g1767 27 22810456 22813456 Lele03g0371 03 2129294 2132641 CCT
Lele27g1767 27 22810456 22813456 Lele04g0367 04 2173145 2176492 CCT
Lele25g0319 25 1926844 1929825 Lele27g1767 27 22810456 22813456 hybridization
Lele26g0331 26 1988675 1991670 Lele27g1767 27 22810456 22813456 hybridization