Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1731 ATGTTTGCATCCTCTGACAGATGGTCGGCAATTGCGTCCCATCTTCCGGGCAGGACTGATAACGAGATCAAGAATTTCTGGAACACACATCTAAAGAAGAAGTTAATTCAGATGGGTTTTGATCCAATGACCCACCAGCCACGAACAGATCTTGTTTCCACCTTGCCCTATCTGCTAGCTCTGGTTAACAATATGACAGATCATCAAGCTTGGGATGATCAGGCTGTGAAACTCCAAGCAGAGGCAATTCGGTTGGCAAAGTTTCAATATTTAAACTCTTTACTCCAACCCACAACTTCCTTGAATACCATTACCAACTCCTGTGATCAAAATGGCTTCATCACAAACATGGAAGCTATGAATTTGTTAAATTCAATGGCCAATTTGAAAGAGAACCCAGATATGAACTACCCACAGTTGAATAATAATCCAGGCTCATTTTCTCATCAGGGGATAGTAGCTACCCAACCACTCCATCACCCAAACATGTTATCTCACATGTCCGGCCCACCACAAGTAGTCCCTTTCAGCTCCCAATCATGTTTGAATTGTGATCATCAGGGTCAAGGTGCAAACTTGACAATGATTAGTGAAAGCGATCATACCACACCTGATCATGAATCTTCATCAATATTATTTCCATCTTCCATGCCCCCTCTGGTTGGAGATGCCACTTGCTGCAGCTCTTCTAGCTATGCAGGAATTTCCTCATCTTCTTATTGGACAGAACTATTTTTCGAGGACCCTATTACGCATGAGCTATCTTAG 768 0.4271 MFASSDRWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLLALVNNMTDHQAWDDQAVKLQAEAIRLAKFQYLNSLLQPTTSLNTITNSCDQNGFITNMEAMNLLNSMANLKENPDMNYPQLNNNPGSFSHQGIVATQPLHHPNMLSHMSGPPQVVPFSSQSCLNCDHQGQGANLTMISESDHTTPDHESSSILFPSSMPPLVGDATCCSSSSYAGISSSSYWTELFFEDPITHELS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1731 255 Gene3D - 3 35 - -
Lele27g1731 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 35 IPR017930 -
Lele27g1731 255 SUPERFAMILY Homeodomain-like 6 40 IPR009057 -
Lele27g1731 255 ProSiteProfiles Myb-like domain profile. 1 31 IPR001005 -
Lele27g1731 255 PANTHER F14D16.11-RELATED 6 185 - -
Lele27g1731 255 Pfam Myb-like DNA-binding domain 6 31 IPR001005 -
Lele27g1731 255 CDD SANT 6 31 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1731 Lele-ChrLele27 22599917 22600684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1731 5 255 MYB Transcription Factor Family AT1G34670 40.418 3.27e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g1731 Myb_DNA-binding 3.7e-07 CL0123