Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1728 ATGGATAAATTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTAGCTTCACGTTCTTCATCAAGCACTGGTAAGGGGAAAAATAATGAAGGATCAATAAAGTATGGTTTTTGCCTAGTAAAAGGGAGAGCTGATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATTCAGGGAAAAGAGTTAGGTTTGTTTGCCATTTATGATGGCCATTTAGGAGACCGCGTACCTGCCTACTTACAGAAACATTTGCTTACCAATATCATAAAGGAGGAGGAATTCTGGCAAGATCCCACTGGATCCATCTCAAAAGCTTATGAGCGAACAGATCAGGCAATTCTTGCAAATAGTTCTGATTTGGGGCGTGGTGGGTCTACTGCTGTAACTGCAATATTGATCAATGGCCAAAGGTTGTGGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCATGCTGAGCAAATGACTATAGACCATGAACCCAACACTGAACGAGGCAGCATTGAGAATAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAGTTAGCTGTATCACGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTACGGTCAGACCCTGATGTACGGAATACTGCTATAAATGCCGATATTGATATTTTAATCCTGGCAAGTGATGGACTTTGGAAGGTTATGTCTAATCAAGAGGCAGTTGATATTGCTAGAAGGATGAAAGACCCACAGAAAGCAGCTAAGCAATTAACGTCTGAAGCATTGAAAAGAGATAGTAAAGACGATATATCTTGTGTTGTGGTTAGGTTTAGAGAAGCTAATCGGTGTGCTAGTATTTTAGCTAGGTTATCTCATGACTCAGTGATATCTTTAATCATTCCTTATCTTGGTGCAAAGAGATGCTCGCTTAAAGGCACCAACCATACTAAATCCTCGTTGTCAAAGCGTGAGCCCAGGCAACAATTCATGGACAAGGATAGGACCTATGAAGAGCACCCCCTTCGAGATGCACCCTCACCAAATGGACATACTGATCAGGACGTCTCACAAGAGAATTGCTCAGAACTGTAG 1104 0.4194 MDKLCCFKSSYSQLVASRSSSSTGKGKNNEGSIKYGFCLVKGRADHPMEDYHVAKFVQIQGKELGLFAIYDGHLGDRVPAYLQKHLLTNIIKEEEFWQDPTGSISKAYERTDQAILANSSDLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGHAEQMTIDHEPNTERGSIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVRNTAINADIDILILASDGLWKVMSNQEAVDIARRMKDPQKAAKQLTSEALKRDSKDDISCVVVRFREANRCASILARLSHDSVISLIIPYLGAKRCSLKGTNHTKSSLSKREPRQQFMDKDRTYEEHPLRDAPSPNGHTDQDVSQENCSEL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1728 367 MobiDBLite consensus disorder prediction 316 367 - -
Lele27g1728 367 SUPERFAMILY PP2C-like 32 283 IPR036457 -
Lele27g1728 367 CDD PP2Cc 33 281 IPR001932 -
Lele27g1728 367 SMART PP2C_4 26 279 IPR001932 -
Lele27g1728 367 FunFam Probable protein phosphatase 2C 39 25 282 - -
Lele27g1728 367 PANTHER PROTEIN PHOSPHATASE 27 281 - -
Lele27g1728 367 MobiDBLite consensus disorder prediction 321 349 - -
Lele27g1728 367 Gene3D - 29 289 IPR036457 -
Lele27g1728 367 MobiDBLite consensus disorder prediction 353 367 - -
Lele27g1728 367 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lele27g1728 367 SMART PP2C_SIG_2 45 281 IPR001932 -
Lele27g1728 367 Pfam Protein phosphatase 2C 43 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1728 Lele-ChrLele27 22574423 22581312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1728 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.528 2.32e-150 424