Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1701 ATGAGTGCCGATCATCCAAGAACAGATGTTATGAGGAAGAAAAGGAAAGGAAGCGAGACAGATGAATCCTCAAATCTTCCAGAAATTTTGACTTCACATCATGTGAACCATGGTTCTCTGTCATCAAATTTGAAGTCTCATTACTCGCTTGAAGATTGTTGCAGGTTGAAGAAGAGGTGTAAAGAAGGTGCTGATGCGGAACCGGTTGCTTCCTGTAATAAAAGACTTGCAGGCTTTGCCACCGCTCCACCCTGTGGGACGTCATCTTTGATCACGCCTGGAAGAGGTCTTAAGAGGAAGATAGGATGCATTGATGTTGCTACCCAAATGGGCAGGAAGAAGAAGATAGAGGATGATTATGCTTTTGGTGCAACAATTGGGCAAGGCAAATTTGGATCTGTATCTTTGTGTCGGTCCAGGCTTAGTGGAACAGAATATGCATGTAAGACCCTGAGGAAGGGGGAGGAGACAGTTCATCGAGAGGTGGAGATAATGCAACACTTATCTGGACATCCAGGGGTTGTGACGCTGCAGGCAGTGTATGAAGAAGCTGACTGCTTCCATCTTGTAATGGAGTTGTGTTCTGGAGGGCGATTGATTGATAGGATGGTTAAGGAGGGACCTTATACAGAGCAAAGGGCTGCTAATGTACTCAAGGAAGTGATGTTAGTCATAAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAACCTGAAAATATCCTGCTAGCAGCTTCAGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAACATCTAATGGTCAGAACTTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCTCCGGAGGTATTGCTGGGTAGCTATTCTGAGAAGGTGGATGTATGGAGTGCTGGAGTTCTCCTGCATACTCTGTTAGTTGGTTTTCTTCCATTTCATGGAGATTCGTTGGAAGCAGTTTTTGAGGCTATTAAGAGTGTCAAACTGGATTACCAAAAGGGTATGTGGGATTTGATATCTAAGCCCGCCCGAGATCTTGTTGGGAGGATGCTGACAAGGGATGTTCCAGCAAGGATAACAGCCGATGAAGTACTTAGGCATCCATGGATACTATTCTACACAGAACCAACTCTAGAAAAACTGCCCCTCAGAACAAGGTTGAAGCATCAAATAGGAGCCACTTGCCGCCTGTTTGTAGCGCCTGGACATCGATCAGGTGGAAACAAGATAGACGATGGGGAAATTTCAAGCCCGCTTTCATCCTCGGAGAGTAGCGATTCAGAAGATGATGAGGATGATGGCGTGTTGATTGATGTGCTGGCATCTGCAATTTCACATGTGAGGATATCCGAACCCAAGAGAAGCAGGTTGTGTGGTCCAACAGGTCCAATAGATCAGCAAGGATCATCTAACTTGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1440 0.4521 MSADHPRTDVMRKKRKGSETDESSNLPEILTSHHVNHGSLSSNLKSHYSLEDCCRLKKRCKEGADAEPVASCNKRLAGFATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYAFGATIGQGKFGSVSLCRSRLSGTEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKEGPYTEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLAASGKIKLADFGLAMRTSNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHTLLVGFLPFHGDSLEAVFEAIKSVKLDYQKGMWDLISKPARDLVGRMLTRDVPARITADEVLRHPWILFYTEPTLEKLPLRTRLKHQIGATCRLFVAPGHRSGGNKIDDGEISSPLSSSESSDSEDDEDDGVLIDVLASAISHVRISEPKRSRLCGPTGPIDQQGSSNLKANNLCKAF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1701 479 Gene3D Transferase(Phosphotransferase) domain 1 111 394 - -
Lele27g1701 479 PANTHER SERINE/THREONINE-PROTEIN KINASE 106 388 - -
Lele27g1701 479 MobiDBLite consensus disorder prediction 403 429 - -
Lele27g1701 479 Pfam Protein kinase domain 121 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1701 479 CDD STKc_CAMK 119 367 - -
Lele27g1701 479 FunFam Serine/threonine-protein kinase PEPKR2 111 434 - -
Lele27g1701 479 MobiDBLite consensus disorder prediction 1 29 - -
Lele27g1701 479 SUPERFAMILY Protein kinase-like (PK-like) 117 389 IPR011009 -
Lele27g1701 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Lele27g1701 479 ProSiteProfiles Protein kinase domain profile. 120 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1701 479 MobiDBLite consensus disorder prediction 1 22 - -
Lele27g1701 479 SMART serkin_6 120 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1701 479 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1701 Lele-ChrLele27 22381896 22388267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1701 104 367 EF-hand Containing Proteins AT2G38910 43.636 1.89e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele27g1701 Pkinase 5.5e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0382 25 2327533 2330527 Lele27g1701 27 22381896 22388267 hybridization
Lele26g0398 26 2401631 2404652 Lele27g1701 27 22381896 22388267 hybridization