Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1698 ATGGTTGGTCAATCATTTCAAAGAAAGCATTGGATTCGTATAAGCAGAAAGTTTGTCACACTCTCATATGCCCGAACGGACTGGCTCTGCACCAATTTGTTTGCCAAAAAAAGAAGCAATGGGATGCATAACTTCTACTACTTCAACCTCGGAGTTGCACTTCTTTGGATAAGGGATTTTCGGCAATCAGACCATTTTAGGGATCATCCCATTGCTATTGGCTGCGTTGATAGGCAAGTGGCCGGAATCCGTCCTCCAGAAGTTGGATCTCGTTTTCGCCGATGCTCCGTTTCCTTGCCAGGGTCCGACGTCGAATTCAACAAGGAATTTACAGATTGCATCAACTTTGATGAATGCCTGAAATATATAGAGGATTTCATGATCGAGCACGGTCCCTTTGACGGTCTTCTCGGTTTCTCTCAGGGAGCGATATTGTCAGGTGGCCTGCCGGGGCTCCAGGAGAAGGGTTTGGCATTAAGCAAGGTTCCGAAAGTGGAATTCTTGATAATAATAGGAGGAGCTAAATTCAGGGCACCTCGCGTGGCTGAGAAAGCTTATTCTTCGCCAATTACGTGTCCTGCCCTCCATTTTCTTGATGATGATAGTTTGAAGGCCGTGACAAGTTTCATCGAAAGAGTTCCAAAGTCATAATCAAGAAGAAGCCGAGCCAAACGGAAGCACCCAATGCGCGGGTCGGTGAGGAAGACAATAGCGATGACACGTTTATACCTTAACCACGCACTCACTCATTCTCAGAACGCTCTCTTCTACGCCAACGTCCCCAAACCCCCCTCCGCTTCTCCTAAACTCCTCTCTGGCATTCGAGGCGCAATTTGTACCCCGAGAGTTAGGGCATTTTGCACTGTGCCCACTGAAGCTGCAGGGTTCAGAGCTGCTGTGTTGGGGCAAACCATGGACAGCCACGACTCTATTTCTTACCTGACTCAGCGGGAAGCTGCCGAGATTGATGAGATCCTCATGGGTCCTCTTGGATTTAGTGTCGACCAGTTGATGGAATTGGCTGGTTTGAGTGTTGCCACGTCCATAGCAGAGGTTTACAAACCAAGTGAGCATGTTCGAGTACTTACTATTTGTGGACCTGGGAATAACGGGGGTGACGGTCTGGTGGCTGCCCGTCACCTTCATCACTTTGGCTATAAGCCCTATGTCTGCTATCCCAAGCGTGCTGCGAAGCCTCTTTATACTGGATTAGTTACTCAGCTTGAATCACTATCTATCCCGTTCGTATCAGTGGAAGATCTGAAATTAGACTTGTCAGAGGACTTTGACATTGTAATAGATGCTATGTTTGGATTCTCTTTCCATGGTGCTCCAAGGCCTCCTTTTGATGATCTGATTCAGAGACTTGTCACTTTACGTAATCATGAACAAGCTGGTCAGAAAAGATCAGTTATAGTATCCATAGATATTCCCTCTGGGTGGCATGTCGAAGAAGGAAATGTTGATGGTAAAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCACCAAAATTATGTGCAAAGAAGTTTAGTGGTCCTCATCACTTTCTAGGAGGTAGATTTGTCCCACCTGCCATTGCAGAAAAATACAAGCTTCATCTCCCACCATATCCTGGAACTTCCATGTGTCTTCGAATTGGCAAGCCTCCTCAAGTTGATATTTCGGCTCTAAGAGAGAACTATATCTCTCCAGAGTTTCTTGAAGAGCAGGTGGATGCAGACCCCATCATACAGTTTCATAAATGGTTTGATGATGCATTGGCTGCTGGCTTGAAGGAACCAAATGCCATGGCCTTATCAACTGTAGGGAAGGATGGAAAACCCTCATCACGAATGGTGTTGTTAAAGGGTGTGGACAAGGATGGTTTTGTGTGGTACACAAACTATGAAAGCCAGAAGGCACATGAACTATCTGAAAATCCTCATGCATCAATTCTTTTCTACTGGGATGGTCTAAACCGGCAGGTACGAGTGGAGGGATCTGTGCAGAAAGTCTCGGATGAAGAATCAGAACAGTATTTCCATAGCCGTCCTAGAGGAAGTCAGATTGGAGCAATAGCTAGCAAGCAGAGTACGGTAGTGCCTGGAAGACATGTTCTTCATCAGGAGTACAAAGAGCTGGAGCAAAAATTTGCTGATGGTAGCTTGATCCCTAAACCCAAAAACTGGGGAGGATACAGATTGACACCACAACTTTTTGAGTTTTGGCAAGGACAGCGGTCTCGTTTGCATGACAGGTTGCGGTATTCCCCCCACGAGATTAATGGACAACGAGCATGGAAGATTGAGCGGTTGGCACCCTAA 2307 0.4625 MVGQSFQRKHWIRISRKFVTLSYARTDWLCTNLFAKKRSNGMHNFYYFNLGVALLWIRDFRQSDHFRDHPIAIGCVDRQVAGIRPPEVGSRFRRCSVSLPGSDVEFNKEFTDCINFDECLKYIEDFMIEHGPFDGLLGFSQGAILSGGLPGLQEKGLALSKVPKVEFLIIIGGAKFRAPRVAEKAYSSPITCPALHFLDDDSLKAVTSFIERVPKSXSRRSRAKRKHPMRGSVRKTIAMTRLYLNHALTHSQNALFYANVPKPPSASPKLLSGIRGAICTPRVRAFCTVPTEAAGFRAAVLGQTMDSHDSISYLTQREAAEIDEILMGPLGFSVDQLMELAGLSVATSIAEVYKPSEHVRVLTICGPGNNGGDGLVAARHLHHFGYKPYVCYPKRAAKPLYTGLVTQLESLSIPFVSVEDLKLDLSEDFDIVIDAMFGFSFHGAPRPPFDDLIQRLVTLRNHEQAGQKRSVIVSIDIPSGWHVEEGNVDGKGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFVPPAIAEKYKLHLPPYPGTSMCLRIGKPPQVDISALRENYISPEFLEEQVDADPIIQFHKWFDDALAAGLKEPNAMALSTVGKDGKPSSRMVLLKGVDKDGFVWYTNYESQKAHELSENPHASILFYWDGLNRQVRVEGSVQKVSDEESEQYFHSRPRGSQIGAIASKQSTVVPGRHVLHQEYKELEQKFADGSLIPKPKNWGGYRLTPQLFEFWQGQRSRLHDRLRYSPHEINGQRAWKIERLAP 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1698 768 Gene3D alpha/beta hydrolase 84 214 IPR029058 -
Lele27g1698 768 Gene3D - 562 759 IPR012349 -
Lele27g1698 768 FunFam NAD(P)H-hydrate epimerase 569 768 - -
Lele27g1698 768 Pfam Serine hydrolase (FSH1) 108 198 IPR005645 -
Lele27g1698 768 SUPERFAMILY YjeF N-terminal domain-like 312 541 IPR036652 -
Lele27g1698 768 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 551 768 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lele27g1698 768 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 561 768 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lele27g1698 768 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 724 768 IPR019576 -
Lele27g1698 768 Pfam YjeF-related protein N-terminus 335 507 IPR004443 -
Lele27g1698 768 ProSiteProfiles YjeF N-terminal domain profile. 319 535 IPR004443 -
Lele27g1698 768 SUPERFAMILY FMN-binding split barrel 569 768 - -
Lele27g1698 768 Gene3D - 310 552 IPR036652 -
Lele27g1698 768 Hamap NAD(P)H-hydrate epimerase [nnrE]. 315 550 IPR004443 -
Lele27g1698 768 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 316 512 IPR004443 -
Lele27g1698 768 Pfam Pyridoxamine 5'-phosphate oxidase 584 670 IPR011576 -
Lele27g1698 768 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 734 747 IPR019740 GO:0016638
Lele27g1698 768 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 554 768 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lele27g1698 768 FunFam NAD(P)H-hydrate epimerase 311 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1698 Lele-ChrLele27 22358257 22366869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1698 116 198 Sulfurtransferasese or Rhodanese AT1G09280 34.940 1.32e-07 53.1