Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1692 ATGGGCTTCTTCTCTTGCAATGCTGAATCTGCCGTCGCCACCTGTGATTCTCACTACTGGGACCTCAAGAAGAAGACTCCCAGCAGAACCAGGAGAAGAACTCATAAGCATAACCTCGTTGACATCAGGCAGTTTCAGTACTCGGAGCTCCTCGCATCCACCGGCGGCTTCTCCTCAGACAGCTTCTTGGGCAAAGGCAGCCATGGCAGTGTCTACAGAGCTACCCTCGACGACGGCAAGCTCATCGCCGCCGTCAAAAGAACAAAGTTCTCCAAGCCTCAGGTCACAAACCTCCGTAACCACTCCACTAACTGTACCGGATGTGCTAACTGTACGAGTCCCGCAGAGAACGAGATCGAGATTCTCTCTCGGGTTCGAAATCCTCGCCGCTTCGTCAACCTCATTGGATTTTGCACCGACTCCGGCGGCAATCAGTTAATTGTCGTTGAGTACATGCTCAACGGTTCCCTCTACGAGGCCTTGCACTCCACCACCAGACCGCCGGGTTGGAGCCGGCGAGTCCGGTTAGCTTTGCAGGTGGCAAAAGCCGTGCTGGCGCTTCACTCTTCGAATCCCCCGGTGATTCACCGAGACATAAAGTCGTCGAACGTTCTGATCGACGAGAAGGGGAAGGCGAGGCTGGGCGATTTCGGCCTGGCATTGAGGGGACACGTAGAGGACGTTCGGGTGAAATGCACGCCACCGGCGGGCACGATGGGATACCTGGACCCATGCTATCTGGCGCCGGGGGATCTAAGCACGAAGAGCGACGTGTTCAGCTTTGGGATCTTGCTGCTGGAGATCATCAGCGGCAGGAACGCCATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCCTTGCCGCTGATAAAGCGAGGGGAGTTCCTCGGAATCTGCGACCGGCGAATCGGGAAGCCATCAGACACGGCGATGATAAGGCAGCTGGGGACGTTGGCCGCAAAGTGTGTAAGGTCGACGGCGGAGAAGAGGCCGTCCATGTCGGAGGCAGTGGAGTGGCTGGAACAAGTGAGGAAGAGGATGGAGGCGACGCCCATATGGAGGGGTCTGAGGCGGCGGGAGGAGAAGAAAGCTGAATTGGGCGATCGGAGCGATCAGGAAGTGGGAAGAATAGTAAGAGGGGGAAGCAGAAGGAACGGGAAAGTGTCGAGCGTGGGTGGCATGGAGCAAGAGAACGAGATGATCAGTGAAGCTCGCAATGGAGTGTCCAGGTCGAGATCAATGCCAAACGGCAATGTGGGCGGGATTGCGAGGAGGCTGAACAGATCAAGATCCATGTCCATGGATGGTTTTGCAAATTTCACTTCACGGACAGAATTACACACGACGGAAGAGGAACAACCCCTTCCAAACCAGATTAACAACCAACGAGCATGTTGTTAG 1407 0.5586 MGFFSCNAESAVATCDSHYWDLKKKTPSRTRRRTHKHNLVDIRQFQYSELLASTGGFSSDSFLGKGSHGSVYRATLDDGKLIAAVKRTKFSKPQVTNLRNHSTNCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCTDSGGNQLIVVEYMLNGSLYEALHSTTRPPGWSRRVRLALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPCYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWALPLIKRGEFLGICDRRIGKPSDTAMIRQLGTLAAKCVRSTAEKRPSMSEAVEWLEQVRKRMEATPIWRGLRRREEKKAELGDRSDQEVGRIVRGGSRRNGKVSSVGGMEQENEMISEARNGVSRSRSMPNGNVGGIARRLNRSRSMSMDGFANFTSRTELHTTEEEQPLPNQINNQRACC 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1692 468 Pfam Protein tyrosine and serine/threonine kinase 61 340 IPR001245 GO:0004672|GO:0006468
Lele27g1692 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lele27g1692 468 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Lele27g1692 468 MobiDBLite consensus disorder prediction 449 468 - -
Lele27g1692 468 SUPERFAMILY Protein kinase-like (PK-like) 41 352 IPR011009 -
Lele27g1692 468 Gene3D Phosphorylase Kinase; domain 1 28 151 - -
Lele27g1692 468 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1692 468 MobiDBLite consensus disorder prediction 453 468 - -
Lele27g1692 468 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1692 468 Gene3D Transferase(Phosphotransferase) domain 1 152 358 - -
Lele27g1692 468 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
Lele27g1692 468 PANTHER OS01G0253100 PROTEIN 29 350 IPR045271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1692 Lele-ChrLele27 22325455 22326861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1692 43 384 Receptor kinase-like Gene Family AT3G59420 38.375 3.32e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele27g1692 PK_Tyr_Ser-Thr 9.9e-35 CL0016