Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1689 ATGGGAAAAGAATTTGGAACCTGTCTGCCGCAGCTGCATTTTGATTGGCAATCACCCAATTTGAGTTCCTTTGGCGCTAACCTTGACGCGGGGAAGCGAAATGATTCTGCATTTATGAGCCCTGGCATAAATATGATGTCTGAAAATTACACAATGCCAGACTATGCACCCTCCATGCTACCACATTCGGAGTTAGGACAGTCTAATGAACCTTGTGGTTGGTCCTATGGTTCACCTCACTTTCAACAGGTATTCATGCGTGCTCCAAACCTCAATTGGGAGAGCAAGCTCTCTTCTGGCCAGGAAAAAGGTATTAAGGAGGAAATTGCACCCGACGGGATACTGGGCTTCCCTAAGAAGCAGTTCATCGTTGTTGATCAGACTGTCAATCAAACAACATTCGTTTATAGTCCTGGGTTTGGAAGTCCCATTGAGTGCCTTGCTTCTTGGCATTCAAAGCTGCATGGTCCTGACTATTTGAATGGGAATGAGCCTTCTTTTAGAAGAGATTTGAATAATCTGAATGGACCAACTTTGACCGATAAAGTTGATAAAAATCAGGGAACAGAGGTCCAAAGTGAGATGCATGAAGACACGGAAGAAATCAATGCGCTACTTTACTCTGATAGTGATGGTTACTCCACTGAGGATGATGAAGTTACTAGCACAGGGCGTTCGCCGAGTATAATGACCACTCATGATGACCAAGACTTCTGTTTTGGACGCAATGAAGGATTTGGTAGCTGCAATGAAGAAGTATGCAGCTCTGCTGGGAAAACAAAGAAGCGGAAGCTGTCAGACGATGGGGCTTATGATGACCTACAGCTCATGGACAGTGCCAGTTCTCTGAATCTGAATAGATCCTTTGATAATGGATACGATGCTGAATCAAGATGTTCTAGCGGCAGCAGTCAAGGATCAGAGAACAAGAAGATGAGAATAGAGAGGATACGAGATGTTCTAAACGTTCTGCAAACCATAATTCCCGGTGGGAAAGAAAGGGATCCAATTGGGCTTCTTGATGAAGCGATATGTTGCCTGAAATCACTGAAACTCAAGGCTAGAGCTCTAGGACTCCATGACTTGTAA 1089 0.4435 MGKEFGTCLPQLHFDWQSPNLSSFGANLDAGKRNDSAFMSPGINMMSENYTMPDYAPSMLPHSELGQSNEPCGWSYGSPHFQQVFMRAPNLNWESKLSSGQEKGIKEEIAPDGILGFPKKQFIVVDQTVNQTTFVYSPGFGSPIECLASWHSKLHGPDYLNGNEPSFRRDLNNLNGPTLTDKVDKNQGTEVQSEMHEDTEEINALLYSDSDGYSTEDDEVTSTGRSPSIMTTHDDQDFCFGRNEGFGSCNEEVCSSAGKTKKRKLSDDGAYDDLQLMDSASSLNLNRSFDNGYDAESRCSSGSSQGSENKKMRIERIRDVLNVLQTIIPGGKERDPIGLLDEAICCLKSLKLKARALGLHDL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1689 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
Lele27g1689 362 PANTHER TRANSCRIPTION FACTOR BHLH145 9 360 IPR037546 -
Lele27g1689 362 MobiDBLite consensus disorder prediction 207 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1689 Lele-ChrLele27 22302861 22303949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1689 72 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.743 4.52e-21 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0396 25 2400807 2401886 Lele27g1689 27 22302861 22303949 hybridization
Lele26g0408 26 2474592 2475683 Lele27g1689 27 22302861 22303949 hybridization