Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1679 ATGAAAGGTGAATATGTAGAGCAACAGGCCAAGGCCGATGCTCCCAATATGTTCTCCAAGCTTCACCACCACCATCCCTTCCCTCACCATCCTTTTCAGCTTTCTCGCGAATCTCAGACCTCTGAGGAAGATGATACTCGGCGCGCCACCCCCAACCACCCTCAAAAGCCCATGTCCGTTGAACCCTCCTCCGCCGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCTAGAGGCCGCCCTCCTGGCTCCAAGAACAAGCCCAAGCCCCCCGTCATCATTACTCGCGACCCCGAGCCTACCATGAGTTCCTTCATTCTCGAAGTCCCCGGCGGTACGGATGTCGTTGAAGCGATTGCTCGCTTTTGTCGCCGCAAGAATACCGGTCTCTGTGTGTTAACGGGATCGGGAACCGTCGCTAATGTCACCCTCCGTCAACCCTCTACTACCCCGGGGGCTACCGTTACTTTTCACGGTCGTTTTGATATCTTATCCATATCCGCCACCTTTCTGGCCAACCAGCAATCGGGCGCTTTGCCAGCTGTTCCCAACAGCTTCACGATATCTCTGGCGGGTCCGCAGGGTCAGATCGTTGGAGGAATAGTCGCCGGCAGTTTGTTGGCGGCGGGAACCGTGTTCGTCATAGCCGCTTCCTTCAACAACCCATCCTACCACAGGTTGCCAGCCGAAGAGGACGTCAGGAACTCCGTCTCGGGAGGCGGCGGCGGAGATGGGCAGTCCCCGCCGGTGTCGGGAGGCGGTGGGGAGAGTGGTCACGCGCCTGATGATTCGTGTGGGATGTCTATGTATAGCTGTCAACTACCGTCCGATGTGATCTGGGCTCCAACAGCAAGACCACCGCCACCATACTGA 873 0.5796 MKGEYVEQQAKADAPNMFSKLHHHHPFPHHPFQLSRESQTSEEDDTRRATPNHPQKPMSVEPSSAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSFILEVPGGTDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANQQSGALPAVPNSFTISLAGPQGQIVGGIVAGSLLAAGTVFVIAASFNNPSYHRLPAEEDVRNSVSGGGGGDGQSPPVSGGGGESGHAPDDSCGMSMYSCQLPSDVIWAPTARPPPPY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1679 290 MobiDBLite consensus disorder prediction 36 51 - -
Lele27g1679 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 231 - -
Lele27g1679 290 MobiDBLite consensus disorder prediction 52 66 - -
Lele27g1679 290 PIRSF ESCAROLA 9 281 IPR014476 GO:0003680
Lele27g1679 290 MobiDBLite consensus disorder prediction 19 99 - -
Lele27g1679 290 CDD DUF296 105 219 IPR005175 -
Lele27g1679 290 FunFam AT-hook motif nuclear-localized protein 103 238 - -
Lele27g1679 290 Gene3D - 102 237 - -
Lele27g1679 290 ProSiteProfiles PPC domain profile profile. 99 240 IPR005175 -
Lele27g1679 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 281 IPR014476 GO:0003680
Lele27g1679 290 MobiDBLite consensus disorder prediction 233 266 - -
Lele27g1679 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 221 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1679 Lele-ChrLele27 22229808 22230680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1679 1 290 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.135 1.15e-107 312