Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1675 ATGGCGAAGGTGACCAGGAATGTATTGGTGGGGGCTCATTATCAGCTAAAAGCAGCGCAAGTGCAAGGGTGGGGTCTCGATAGTTACCATACATATTCTCATTCACTTTCTGATGAATCAGGAGGTGCATTCCTTTATGGTGCCAATTATTGCTACGTACTTCCAAAACTTGCAGGCATCATCGATCATGGTGCACCAGCTGTAGCAGGAATGAGGCAAATAATGAATCAGCGTGCAGCTATAGCTTGCTCTTGGGGATTTGCAAAAATACAGAGCCTTGTGCATTATACTGGTTGCTGCAGCGCAGAATGCGCTAGTTACTCTGGTGATCTGATCTGCAGCCCTCTCAGGAGTTTCTATGGCTTTGAGAGCTGGTTAGATCAGAGCGCGCATTCTCAGGAACCCACCTCGTCCTTCAAGTCCATGGAATTGGATAACGGCAAACCAATTCTCGACTCCACATCTAAGTCTGAGAGGAAATCAATGGAAGCATGCAAGAGCCATAGAGAAGCTGAGAGGAGACGCAGGCAGCGAATCAACGCCCACCTCTCCACTCTACGTTCTCTCCTCCCTAACGCCGTAAAGTCGGATAAGGCCTCGTTGCTAGCGGAGGTGGTCCGACGCGTCAAATATCTAAGGAAACAGGCCGAGGACGTGGCTCGCCTTCACGACGGAAACTTGTCGGGAAGCACTGCCAGCGGAGAATCTGGGTCGGATCCCGGAGACTCGGAGCAGTGGATGTTGCCGGGAGAGTCGGACGAGGCGACCGTGAGTTACTGCGACGGAGGTGGGGAGAGTAAACTCATGAAAGCCACGCTCTGCTGCGAGGACCGGCCCAACCTGAACCGAGATCTAGAGGAGGCGATCCGGTTAGTTCGGGCCAAGGCGGTGCGAGCCGAGATGATGACAATTGGTGGGCGGACCAAGAGTGTGGTGATTGTCCAATGGACTGGTGGAGAAGACGAGGTTGGAGCACTAGAACGGGCTTTGACGGCTGTCGTAGAGAATCGGGCCCTAGTAGGGCCTAGACTGGGCCAGATGACGTTGGGCCACAAACGGGCCCGACATTGTTACGGCTTACCCAATGAGGGCGAAAGCGGCTTCTTGTTGAGGACTGCTAACATGTAA 1128 0.5319 MAKVTRNVLVGAHYQLKAAQVQGWGLDSYHTYSHSLSDESGGAFLYGANYCYVLPKLAGIIDHGAPAVAGMRQIMNQRAAIACSWGFAKIQSLVHYTGCCSAECASYSGDLICSPLRSFYGFESWLDQSAHSQEPTSSFKSMELDNGKPILDSTSKSERKSMEACKSHREAERRRRQRINAHLSTLRSLLPNAVKSDKASLLAEVVRRVKYLRKQAEDVARLHDGNLSGSTASGESGSDPGDSEQWMLPGESDEATVSYCDGGGESKLMKATLCCEDRPNLNRDLEEAIRLVRAKAVRAEMMTIGGRTKSVVIVQWTGGEDEVGALERALTAVVENRALVGPRLGQMTLGHKRARHCYGLPNEGESGFLLRTANM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1675 375 MobiDBLite consensus disorder prediction 136 174 - -
Lele27g1675 375 MobiDBLite consensus disorder prediction 152 174 - -
Lele27g1675 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Lele27g1675 375 Gene3D - 157 223 IPR036638 GO:0046983
Lele27g1675 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 222 IPR036638 GO:0046983
Lele27g1675 375 PANTHER TRANSCRIPTION FACTOR BHLH30 139 356 IPR045847 GO:0003700|GO:0006355
Lele27g1675 375 MobiDBLite consensus disorder prediction 222 248 - -
Lele27g1675 375 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Lele27g1675 375 SMART finulus 169 218 IPR011598 GO:0046983
Lele27g1675 375 MobiDBLite consensus disorder prediction 136 151 - -
Lele27g1675 375 MobiDBLite consensus disorder prediction 226 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1675 Lele-ChrLele27 22207463 22212209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1675 160 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.323 7.94e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele27g1675 HLH 4.7e-10 No_clan