Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1672 ATGAAGGACATAATTACGAGGTATAATTTGTACTCTCGTGACATCAACAAACAAGACAGACCTTCTCTAGAACTGCAGCTAGAGAACAGCGATAACAGCAAATTGAGTAAAGAAGTCGCCGAGAAAACGCAGCAGCTAAGGCGCATGAAAGGCGAAGATCTTCAAGGACTTAACCTAGAAGTTTTGCTTCAACTGGAGAAACTGCTTGAAACAGGACTCGGCCGCGTCATTGAGACAAAGGAAAATCGGATGATGAGTGAGATCACTGCTCTTCAGAAAAAGGGAATTGAGTTGGCAGAAGAGAACAAGCGGCTGAAGCAGAAGATGGAGATGTTGCGTAGAGGAATAATGCAAGTTCAGGCGGTGGAGTCATCGGATATTGGGATACAAGAAGAAGGCGTCTCATCAGATTCAACGACCAACGTTTACAGCTGCAACAGTGGCCCTCCTCTTGACGATGATTCTTCTGACACTTCTCTCAAGTTAGGGTAA 492 0.4492 MKDIITRYNLYSRDINKQDRPSLELQLENSDNSKLSKEVAEKTQQLRRMKGEDLQGLNLEVLLQLEKLLETGLGRVIETKENRMMSEITALQKKGIELAEENKRLKQKMEMLRRGIMQVQAVESSDIGIQEEGVSSDSTTNVYSCNSGPPLDDDSSDTSLKLG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1672 163 MobiDBLite consensus disorder prediction 128 163 - -
Lele27g1672 163 Coils Coil 88 122 - -
Lele27g1672 163 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele27g1672 163 Pfam K-box region 29 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele27g1672 163 Coils Coil 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1672 Lele-ChrLele27 22188133 22189270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1672 1 163 MADS-box Gene Family AT2G22540 52.000 1.30e-50 160