Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1671 ATGAGCTGTTCAATGCAGCTGTCTCACGACATTAGGGCCTACGATAATGGTGGATGCTGTAGTTTTCATCATAAACCAATGGGCGTTGCTCGATTACATTTGGTTACCATCAATCTTTTGCCGCATGGTTTGAGGCGTGATTCTTCAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCACTAAGGCCTGTTCCTACCAGATGTAATGGTTTATTGTGCCGTTCCATACTAATACCAGGCGGAGGGAGTTTGACCCCACTAACGAAATCCGCTTCTGTTATCTTGAAAAGGTCATATGATGCTTTTCAAGGAAGCCCTGTCACTACTCAGTTGATCCCAGCCCTTGGTGTCATTGCATTTGCTGTTTGTGGTCTTGAACCTCTTATGCGTCTGTGCAGGATTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCGCGTTATATTATGACGTCTTATTTTCAGCCTTTGCTGTTGTGGACTGGGGTTATGCTCATCTGCAGGGCATTAGATCCACTAAACCTACCATCAGAAGTCAGCCAGGCAGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTTTGTCAACTGTGCTCTCGTTTGCTTACTGTTTGTCAAGCTTCATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGAATCCAATGAGGCAAGAAATATGGGCTTTGATTTTGCTGGGAAATCTGTGTATACTGCTGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTCGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTATTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACAAAGATTGATGGATACGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACTCAGAGAACTCATTGGCGTATCAAGACTTACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGACATGCGCAAAGTTTTGGCCAAAAATCCTCTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGGAGGTCAATCCTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTGTGTGTCCAGGAGGCCATCCTATTGGATCTTCTGAGAGTTATTAGTCATCATCGGGCCCGGCTAGCCACACCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTTGGTGACACCATGTTTACTCGCTCCAGAGCAGCAGAAAATCGCCCATTTCTACTGATAGAGCCGCCTTACAAAGTTAATGGTGAAGATAGAACCAAGGCTTCTACTCGTTCAACACGTCCAAGTGACGAAAAAGATGCCAAAATTGATGAAACATTGGCATTTGATTCCAAAGACGACAATTTTGCAGCGACATCAACAACATCCAGTGCAAACTCCAGGGATACCTCAAAGTCAATCTCTGAAGCACAAGCTCCGAATTTGGGTTCTGATAGTACTGTACAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAATGCAGGAGATGCCGCAAAGGGGCTTGCTGCCCCAGTAAATAAAGACCTTGCTCAAAGTGTTGCCCTTGAAAATTCTGCTTCTTCACATGAGTTTGCTGGAAGGGGAGATACCACTCCTGCTACATCTTCACAGGCAAAGCAGGACGAAGACAAACATGCTGTATCCTCCTCACCGGCCAGGCCTTCCATGGAAGAAAATATTGTTCTTGGCGTTGCCCTAGACGGCTCAAAACGAACTCTTCCGATTGACGAAGAAATGACTCCACCTCCCAACCCCACAGAGGCACAAGAATTTGCTTCCCAAAGAAATGGGAATGGATCTGCTAACAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCAGAGTGATTGA 2097 0.4354 MSCSMQLSHDIRAYDNGGCCSFHHKPMGVARLHLVTINLLPHGLRRDSSALHLLSKVHAPLRPVPTRCNGLLCRSILIPGGGSLTPLTKSASVILKRSYDAFQGSPVTTQLIPALGVIAFAVCGLEPLMRLCRIIFLQRNDNSWKKSSSRYIMTSYFQPLLLWTGVMLICRALDPLNLPSEVSQAVKQRLLNFVRSLSTVLSFAYCLSSFIQQAQKFFMEANESNEARNMGFDFAGKSVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTYLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEEVNPENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTMFTRSRAAENRPFLLIEPPYKVNGEDRTKASTRSTRPSDEKDAKIDETLAFDSKDDNFAATSTTSSANSRDTSKSISEAQAPNLGSDSTVQKTSKTTQPKKENAGDAAKGLAAPVNKDLAQSVALENSASSHEFAGRGDTTPATSSQAKQDEDKHAVSSSPARPSMEENIVLGVALDGSKRTLPIDEEMTPPPNPTEAQEFASQRNGNGSANKDKKDGQISTKQQSD 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1671 698 Gene3D - 191 294 - -
Lele27g1671 698 MobiDBLite consensus disorder prediction 493 524 - -
Lele27g1671 698 SUPERFAMILY Sm-like ribonucleoproteins 280 350 IPR010920 -
Lele27g1671 698 MobiDBLite consensus disorder prediction 526 572 - -
Lele27g1671 698 Gene3D - 295 348 IPR023408 -
Lele27g1671 698 MobiDBLite consensus disorder prediction 595 618 - -
Lele27g1671 698 MobiDBLite consensus disorder prediction 595 698 - -
Lele27g1671 698 Pfam Mechanosensitive ion channel 239 444 IPR006685 GO:0016020|GO:0055085
Lele27g1671 698 MobiDBLite consensus disorder prediction 489 581 - -
Lele27g1671 698 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 3 693 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1671 Lele-ChrLele27 22180226 22185438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1671 2 659 Mechanosensitive Ion Channel Family AT1G58200 55.738 0.0 729