Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1649 ATGGCGGAGGACGCTTCTCTACAACTTTCTTTCCCTCCCATAAACCCATATCACCGATCCTTACACCGCCTCGAGACCTCTTATTACGTTCGATTTCCTCAAACCCTAGCTCCTAAATCCCTTAAATCTGATTCAATTCTTAAAACCCTAGCAATGGAGGATCATTCCCTCGCTTCCCACCCCGATTCCCGCCATTCCTCGCCTCATTCTCAAGAAGCCGACCACGAGAATCCTTCGATGGACGATCCTCTTTTCACCACCACCAACAACAACAACCAAAAGGTGAAGTTCGTGTGCAGCTATGGCGGAAATATTCAATTTAGGAGCCATGATAATCAGCTTGCTCACGTCGGTGGCGATACCAAGATCATAACCTTTGACCGCAGCATTACGTTCTCTGCTATGATGGCGAAGCTCTCTTCTCTCTGCAATAATGCTGATGTTTTCGTCAAGTACCAACTTCCCGGTGAAGATCTTGACGCTTTGATTTCGGTCACTAACGATGAGGATCTAGAGCACATGATGATCGAGTATGATCTGTCTCAACGTGCGTCGGTGAAGCCCGCTAGGTTGAAGCTGTTCCTGTTTCCACCAAAATCTTCGGCTCCGATGAGTTTCGAGTCGAACGATTTGAAACCGGAGCATCAGTGGTTTGTAGACGCTCTCAATTCCGTGCACATTCCACATGTTAAGGGATCTTCAACGTCGGCACCTATATCGGCTGCGAATCCGGATTTTCTGTCTGGATTGGATTACACATATTCAGTTGTTTCAACGACGAAATTGCCTGATTCTGTTACTCCTGCTGCGTCCGCCATTCCGCGTGTAGAAGCAAATGGTTCGCCTACTGGAACGGACGGGGGATCGGTAGATCGGCACATCGTTGGAGAACCCGCGAGATCACCAAATGAGAGTCAGATACAGATCGAGGAGTCACAGAGATCGCATTTGGAAAAGAGTGACCAGATCCTACCAAAAGGCGATGAAAACAATGGCACAGTTAGTAAAACCATGGATCACTACTCTCAGAAAAAACCAGAGAAAGAGCAGACGCCGCCTGTTCACATAGTTCCAGCTCCGTTATCAATTCCGGCATCGGCGGCACTTTATTCGCCTGAAAGACTCATGACAAGTGCTAGTTATTCGTTAGCGGCTTCTGCAACTGTTACTGAGCAGCCGTTGTATCTCATTGCAACCCCAGCCATAATGTACCATGCTACTACTTTGCGAGCCATGACTGGACCTGTAGGTCAGCCATTCTATAGAGTCCCAAGAATGGTCCAAACAAGTGAGTTCTACAATGGAGCTCCACTGGCATCACTTTCACATTCACATTCACAGTCCAGTATCGGAGCTAACGGCGTTGAAACTAGTGCAATAGTACAGCAAAAGGTTGAGGTGGCAGAGCCTGCTGGATACCAGCAGATGGTATACGAGGACGCCGGCCGAAGGCAGGTCTTCATTGCGACCCCGGCAAACTGGGGTGGGGTGGTGCCTCCACACCTAGAGGTGGCTGCTGGAAGTAATGGGACACAAGGCGGTGGTGCAAACACTCTGAATCAAGAAGGGAAGGTTTCTAAAGCGGCTTCGGCGGTATGA 1599 0.4897 MAEDASLQLSFPPINPYHRSLHRLETSYYVRFPQTLAPKSLKSDSILKTLAMEDHSLASHPDSRHSSPHSQEADHENPSMDDPLFTTTNNNNQKVKFVCSYGGNIQFRSHDNQLAHVGGDTKIITFDRSITFSAMMAKLSSLCNNADVFVKYQLPGEDLDALISVTNDEDLEHMMIEYDLSQRASVKPARLKLFLFPPKSSAPMSFESNDLKPEHQWFVDALNSVHIPHVKGSSTSAPISAANPDFLSGLDYTYSVVSTTKLPDSVTPAASAIPRVEANGSPTGTDGGSVDRHIVGEPARSPNESQIQIEESQRSHLEKSDQILPKGDENNGTVSKTMDHYSQKKPEKEQTPPVHIVPAPLSIPASAALYSPERLMTSASYSLAASATVTEQPLYLIATPAIMYHATTLRAMTGPVGQPFYRVPRMVQTSEFYNGAPLASLSHSHSQSSIGANGVETSAIVQQKVEVAEPAGYQQMVYEDAGRRQVFIATPANWGGVVPPHLEVAAGSNGTQGGGANTLNQEGKVSKAASAV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1649 532 MobiDBLite consensus disorder prediction 510 532 - -
Lele27g1649 532 MobiDBLite consensus disorder prediction 275 355 - -
Lele27g1649 532 SMART PB1_new 109 198 IPR000270 GO:0005515
Lele27g1649 532 SUPERFAMILY CAD & PB1 domains 110 205 - -
Lele27g1649 532 MobiDBLite consensus disorder prediction 57 79 - -
Lele27g1649 532 Pfam PB1 domain 111 197 IPR000270 GO:0005515
Lele27g1649 532 Gene3D - 115 197 - -
Lele27g1649 532 MobiDBLite consensus disorder prediction 57 84 - -
Lele27g1649 532 MobiDBLite consensus disorder prediction 311 325 - -
Lele27g1649 532 MobiDBLite consensus disorder prediction 506 532 - -
Lele27g1649 532 CDD PB1_UP2 98 196 - -
Lele27g1649 532 PANTHER OS05G0427100 PROTEIN-RELATED 60 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1649 Lele-ChrLele27 21988970 21990568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1649 89 225 MAP Kinase Kinase Kinase AT5G57610 40.288 1.27e-24 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0436 25 2724254 2725699 Lele27g1649 27 21988970 21990568 hybridization
Lele26g0447 26 2820220 2822410 Lele27g1649 27 21988970 21990568 hybridization