Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1644 ATGGGATTATCTGATTCTTCTTCTGTGGACAGCTCAGTCCTGTCCTTCTCAGATGAGACTAAAAGTAACCTAAACCTGAAAGCCACAGAGCTGAGGCTTGGCCTTCCAGGATCTCAGTCTCCTGACCGAGACTCGGATCTCTGCTTGAGAAGCTCAACTCAATTTGATGAGAAACCCTTGTTTCCATTGCGCCCATTAACCGACGATCACCACTCTTCAACAAAGACTGCTGTCTTGGGAAGCAAGAGAGGGTTCTCAGATGCCATGAATGGGTTCTCAGAGGCAAAATTTATGGCTGATTCAGAGGCCAATAATGTACGGTCCCCCAGGCCTTCTCATAACATGGGATTAAAAACTAGCTCTATACTTGAGAATCTCGGGTCTCAAGCCAAAGCCAAAGAAGTAACACCAACAAAGGCAACACTTGAGAGGTCACATTCTGTCAATGAAACTAGAGCAAACCTACAAGGTTCTGCAAATAACAATAACAATGCACCAGCTACCAAGGCCCAGGTTGTGGGTTGGCCTCCTATAAGATCATTTAGGAAGAATTCACTGGCTACTACTTCAAAGAATACCGAAGAAGTAGATGGAAAAGAAGGATCTGGTGCACTGTTCATCAAAGTCAGTATGGATGGTGCTCCATATTTAAGAAAAGTAGATTTGAAGAACTACTCTGCATATCCCGAACTGTCATCTGCACTGGAGAAGATGTTCAGCTGTTTCACCATAGGTCAATATGGCTCTCATGGAACTCTAGGCAGGGAGATTTTAAATGAAAGCAAGCTGAAGGATCTGCTTCATGGGTCTGAATTTGTCCTAACCTATGAGGACAAAGATGGGGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCATTGATACATGCAGGAGGCTGAGGATCATGAAGAGTTCCGATGCCATTGGTCTTGCTCCAAGGGCTGTCGAAAAAAGCAAGAGTAGGAACTAG 975 0.4482 MGLSDSSSVDSSVLSFSDETKSNLNLKATELRLGLPGSQSPDRDSDLCLRSSTQFDEKPLFPLRPLTDDHHSSTKTAVLGSKRGFSDAMNGFSEAKFMADSEANNVRSPRPSHNMGLKTSSILENLGSQAKAKEVTPTKATLERSHSVNETRANLQGSANNNNNAPATKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKEGSGALFIKVSMDGAPYLRKVDLKNYSAYPELSSALEKMFSCFTIGQYGSHGTLGREILNESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1644 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 311 IPR003311 GO:0005634|GO:0006355
Lele27g1644 324 ProSiteProfiles PB1 domain profile. 204 306 IPR000270 GO:0005515
Lele27g1644 324 SUPERFAMILY CAD & PB1 domains 202 305 - -
Lele27g1644 324 Pfam AUX/IAA family 29 315 IPR033389 -
Lele27g1644 324 FunFam Auxin-responsive protein 199 316 - -
Lele27g1644 324 MobiDBLite consensus disorder prediction 128 147 - -
Lele27g1644 324 Gene3D - 199 318 - -
Lele27g1644 324 MobiDBLite consensus disorder prediction 154 174 - -
Lele27g1644 324 MobiDBLite consensus disorder prediction 154 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1644 Lele-ChrLele27 21950141 21952467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1644 218 309 B3 DNA Binding Superfamily AT1G19220 31.522 4.37e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele27g1644 AUX_IAA 9.6e-91 CL0072