Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1634 ATGGATCGCCAATCCTTCTTTCTTTTTGGACTCATATTTTCCTTGTCTCTTGCATCACAAGCAACAAGTGACGGACAATTACAGTTTTTTTCTCTAATGAAGAAGTCTCTGTCGGGGAAATACCTGCTAAATTGGGATGTCACGGAAGGAAAACCTGTCTGCAACTTCACTGGAGTTGTCTGCAGCAACCAAGGGGAAGTCATCAACCTCGACATCTCCGGTTGGTCACTTTCTGGAAACTTCCCTTCAGATATATGCTCCTATCTGCCAGAGTTACGTTTTCTACGTCTCGGTCACAATCGTTTAAGAGGAAAATTCCTTGATAGCATCATCAACTGTTTTCACTTAGAAGAGCTCAACATGAATCATGTGTACCATAGAGGAACCCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCAGAGGTCAGTTCCCGATTTCGGTATTTAATCTTACCAATCTTGAGGTGGTTAACTTCAATGAGAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGACATGTATAGGATGAAAAACCTCAAGTCTGTGATCTTGTCGACATGCATGGTGCGTGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCTACAGAGCTTGGAATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAAATTATTGGCAATATACCCAAGGAGCTAGGAAATCTCATGGAGCTCAGAGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCTGTGTGTCGTCTTCCCAATCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATTCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTATCTCTGTATGACAATTTTTTGACCGGAGAAGTCCCAAGAAATCTGGGTCAGTTCTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAAACTGTCTGGTCCATTGCCAACAGAGGTTTGCAGGGGAGGTAAACTGAAGTACTTCCTTGTTCTGGATAATTTCTTTTCTGGAGAGCTACCTGACAGTTATGCAAAGTGCTGGACAATGTTGAGGTTTCGAGTCAGTAATAACCATTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGTCTCCCGCGCGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGTCCAATTTCCGAGACTCTTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGCGTTATACCTCCGACCATCTCTCGAGCTACCAATCTGGTCAAGATTGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATCGGCAATCTTAAAAGGCTTAATTTGCTGATGTTGCAAGGGAATAAGCTGAATTCTCCCATCCCCGGCTCACTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTCTCTGATCTGCTACCGAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCGGGGAATCCTGGTCTGTGTGTGTCACCCGTCTATGCTAACTCATCGGATCAAAATTTTCCCATATGTTCAAAGACTAGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTCTTGATCATAACTGGATCAGCCTTGTTTTTGAAACGTAGGTGTAGCAGAGAGAGAGCTACAGTGGAACATGACGAAACACTGTCTTCGCAATTCTTCTCGTATGAAGTGAAGAGGTTTCACAGGATAACAATTGACCAAAGGGAGATCACCGAGGCCATGGTCGAAAAGAATATAGTGGGGCATGGAGGGTCTGGGACGGTGTACAAGATCGAGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTTTGGAGTCGAAAGTCAAAGGATTCGGTTCCGGATCAGGATAGTTTAGCTTTAGACAAGACATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATAGTCAAGCTGTATTGCTACTTCTTGAGTTTGGATTGCCGCTTGTTGGCAAGAGGAGGGAAGGACTCCACATCCACTGTTATTGCAGGCACATATGGTTACTTGGCACCAGAATATGCTTATTCTCCCAGAGCAACTGTCAAGGGCGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTATATTGGGTTTCAAACAAAGTGGAAAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTAGAAGGGTTTTACAAAGAGGAAATGATTCAGGTGCTGCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAAGTGCTGATTAAGGCAGACCCGTCTAGCAAGTTGTCCAATAGGACCAAAGAAACGTCAAATGCCACTTTGACAAAGAACTCATCATTTGACCTGTAG 2634 0.4339 MDRQSFFLFGLIFSLSLASQATSDGQLQFFSLMKKSLSGKYLLNWDVTEGKPVCNFTGVVCSNQGEVINLDISGWSLSGNFPSDICSYLPELRFLRLGHNRLRGKFLDSIINCFHLEELNMNHVYHRGTLPDFSPMKSLRILDLSYNSFRGQFPISVFNLTNLEVVNFNENAGFNLWELPEDMYRMKNLKSVILSTCMVRGRIPASIGNVSTLVDLELSGNFLTGQIPTELGMLKNLQQLELYYNQIIGNIPKELGNLMELRDLDMSVNKLSGSIPESVCRLPNLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQFSGMVVLDLSENKLSGPLPTEVCRGGKLKYFLVLDNFFSGELPDSYAKCWTMLRFRVSNNHLVGSIPEGLLGLPRVSIIDLSNNNLSGPISETLGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKRLNLLMLQGNKLNSPIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQNFPICSKTSNKKRLSTFWVAGISVVLIITGSALFLKRRCSRERATVEHDETLSSQFFSYEVKRFHRITIDQREITEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWSRKSKDSVPDQDSLALDKTLKTEVETLGNIRHKNIVKLYCYFLSLDCRLLARGGKDSTSTVIAGTYGYLAPEYAYSPRATVKGDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVESKEGASEVLDKRLEGFYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNRTKETSNATLTKNSSFDL 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1634 877 FunFam Leucine-rich repeat receptor-like protein kinase 176 278 - -
Lele27g1634 877 SUPERFAMILY L domain-like 281 540 - -
Lele27g1634 877 FunFam receptor protein-tyrosine kinase CEPR1 630 730 - -
Lele27g1634 877 Pfam Protein kinase domain 735 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1634 877 ProSiteProfiles Protein kinase domain profile. 647 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1634 877 SUPERFAMILY RNI-like 66 368 - -
Lele27g1634 877 Gene3D Ribonuclease Inhibitor 27 304 IPR032675 -
Lele27g1634 877 SUPERFAMILY Protein kinase-like (PK-like) 634 850 IPR011009 -
Lele27g1634 877 PRINTS Leucine-rich repeat signature 498 511 - -
Lele27g1634 877 PRINTS Leucine-rich repeat signature 333 346 - -
Lele27g1634 877 Gene3D Ribonuclease Inhibitor 305 569 IPR032675 -
Lele27g1634 877 Gene3D Transferase(Phosphotransferase) domain 1 725 875 - -
Lele27g1634 877 PANTHER LEUCINE RICH REPEAT KINASE 2 207 728 - -
Lele27g1634 877 MobiDBLite consensus disorder prediction 857 877 - -
Lele27g1634 877 Gene3D Phosphorylase Kinase; domain 1 629 724 - -
Lele27g1634 877 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Lele27g1634 877 FunFam Receptor protein-tyrosine kinase CEPR1 282 568 - -
Lele27g1634 877 SMART LRR_typ_2 89 113 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 136 160 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 234 258 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 282 305 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 498 521 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 330 354 IPR003591 -
Lele27g1634 877 SMART LRR_typ_2 402 426 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1634 Lele-ChrLele27 21880823 21883955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1634 725 865 Receptor kinase-like Gene Family AT5G49660 61.702 3.78e-48 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele27g1634 Pkinase 8e-09 CL0016