Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1603 ATGTTCTTTGATGGATTCCTGTGCAATGGAAGATATCAGGCTCCTCGTTCTTACATAGATTGGGATCCGAGGTTTGATTCATACGAAGAGATCAGAGCGGGTGATCGGGATTGTTGTGCTCCGGTCATAAATATGGCTCAAACTGAATCAAAGCTTTGCATCACGTTTATGTGTTTCCTCATCATGTTGATGACGGCGATGAACTTTGTGGCGTCCCATGGGAAAGAAGAAGACGAACTTCTGTTATCGTTCAAAGCTTCCATTAACAACCCACTTCACCATCTCTCAAACTGGGTCAGTTCTTCTTCCGCTGATATCTGTCACTGGAACGGTGTCACCTGCGATAGTAACTCCCACGTTAGCGCCATCAACCTCTCCGCCAAAAACCTCTCCTCCAACAATATTTCCTCCTTCTCCTCCATATTTCAACTCCCACACGTTGAACACATTGACCTCTCCGATAATCAGCTCTCTGGGGGAATCTCTTTCTCTCTCTCTTCGCTTGTCTATCTCAATCTTAGCAATAACAACTTCACGGGTCCTGTCCCATTTTCGTTTTCCCGTATCCAAATTCTGGATCTCTCGAACAACATGTTTTCCGGGGAAATATCCCCTCAAATTGGATCGCTTACGAGTCTGACGTATGTTGATCTGGGAGGGAATGTTTTGGTGGGGAAGATTCCTGATTCTATCATTAACATGACAGGTTTAGAGTACTTGACCTTGGCTTCCAACCAGCTCGTGGGTGAAATCCCTCCAAAAATTGGCCTTATGAAGAGCTTGAAGTGGATTTATTTCGGGTACAACAATCTCTCGGGTGAGATTCCAGCGGGAATCGGAGAACTGACGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACGGGACACATTCCCAACTCTCTTGGAAACCTCACTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCTTCATCTATTTTTGAGCTTAGAAAGCTTGTTTCGCTTGATCTCAGTGACAATTTTCTGTCTGGTGAGATTCTCGAGCTCGTGATTCAGCTTCAGAGACTAGAGATTCTACACCTTTTCTCCAACAACTTAACCGGCAAGATTCCAAACGCTATAACCTCTCTGCCTCGCCTCCAAGTTCTTCAGCTATGGTCTAACGGATTAACAGGTGAGATTCCTGAAGATTTGGGAAAGCATAATAACCTCACTGTTCTGGACCTTTCCACCAACAAACTTTCTGGGAAAATCCCAGATAGTTTATGTCACTCGGGCGCTCTTTACAAGCTTATCCTTTTCTCCAACTCTCTTCAAGGGGAAATACCGGATAGCTTAACCTCTTGCACAAGCTTGCACCGAGTTCGTCTTCAGAACAACAAGTTCTCCGGTGAATTACCCTCCCGACTAACTCAACTGTCACAGGTATATTTATTGGACATCTCCAGGAACCAACTTTCCGGCAGGATTGATGATAGGCCCTGGAATATGTCGTCGATTCAAATGTTGAATTTGGCTAACAACAATTTCACGGGTGAGTTACCCATCACTTTTGGTAGTACAAAATTGGAGAAACTGGACTTATCAGAAAATCGATTTTCTGGTTATATTCCACTTCGGTTTGGAAGCTTATCGGAGCTGATGCAATTGAATCTGAGCAATAACAAGCTGTATGGTGAAATACCACAAGAGCTCACATTCTGCAAGAAGCTAGTGCTTTTCGATGTCAGCAGCAATCAACTCGCTGGTCAAATTCCGACGAGTCTCGGCGACATGCCGGTTCTCAGCTTGCTGGATTTGTCGGACAACCAATTGTGGGGTCAAATTCCAGGGAATTTAGGAAGAGTGGAATCTCTTGTGCAGGTAAACATATCCCACAACCATTTTCACGGACATTTACCGGCCACTGGAGCTTTCCTCGCCATTAATGCCAGCGCGGTCACTGGCAACGACCTATGTGGTGGTTCCGGCAACACTTCAAGTGGGTTGCCGCCGTGCCAAAAAAGCGATACGAATACATGGTTTGTCGTCCTATGGTTTGTGGTGGGACTTGCGGGGTTTGCATTAGCGGCCTTTCTAGTTACTTGTTCGCGTAGAAGAAAGAGTTCGGAGCTGAAGAGAGTGGAAAGCGAAGATGGTACCTGGGAGATTCAATTTTTCCATTCCAAGTTTGCCAAATCGATCACAAGGGACGATGTTTTATCGTCAGCAAAAGCAGGAAACGTGATCTCCAAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATGGCAAGCGGCATGCAATTCGAGGTGAAGGAAATCAGAGACTTAAATTCAGTTCCTTTGAGTTTCTGGGAAGACATGGCGGAGTTGGGTAAGGTGCGGCATCCAAACATTTTTAAATTAATGGCACTATGCCGTTCTGGTAAAGGAGCATTTTTAGTGTATGAGGATCCAGAAGGAGAGAGTTTAAGTCAAGTTGTGAGGAATCTGAGCTGGGAAAGACGACGGAAAATAGCCGTCGTGATTGCAAAAGCACTGAAGTTTCTGCATGCTCAATGCTCATCAGTTATTTTGGTTGGTGAGCTGTCACCGGAAAGCGTTTTCATCGACCGGAACGACATCCCACGCTTGAAGTTGAGCCCTCCGGCATTGCTCAAGGGTTCCATTTCTTCTCCTTACGTTGCCCCAGAAGCAAGGAATGGGACGGAAGTGACAGAGAAGAGCGACGTATATGGATTGGGTGTTATTCTGATAGAATTGTTGACGGGAAGAAGTGCGGGAATGGAGGACGGGAGCATAGTGGAGTGGGCCCGATATTGCTATTCGGATTGTCATTGGGGAACGTGGGTCGACCCGACAATGAAGGATGGGAAGCAGAACGGCGTCGTAGAGACGATGAACCTGGCCCTGAACTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGACGTCTTCAAAGCCCTCTCTGCTGTGACCTGCACACACACTGCTCTCTGTGTTTCTGCCCTCCAACCATGA 3012 0.4622 MFFDGFLCNGRYQAPRSYIDWDPRFDSYEEIRAGDRDCCAPVINMAQTESKLCITFMCFLIMLMTAMNFVASHGKEEDELLLSFKASINNPLHHLSNWVSSSSADICHWNGVTCDSNSHVSAINLSAKNLSSNNISSFSSIFQLPHVEHIDLSDNQLSGGISFSLSSLVYLNLSNNNFTGPVPFSFSRIQILDLSNNMFSGEISPQIGSLTSLTYVDLGGNVLVGKIPDSIINMTGLEYLTLASNQLVGEIPPKIGLMKSLKWIYFGYNNLSGEIPAGIGELTNLNHLDLVYNNLTGHIPNSLGNLTNLEYLFLYQNKLTGRIPSSIFELRKLVSLDLSDNFLSGEILELVIQLQRLEILHLFSNNLTGKIPNAITSLPRLQVLQLWSNGLTGEIPEDLGKHNNLTVLDLSTNKLSGKIPDSLCHSGALYKLILFSNSLQGEIPDSLTSCTSLHRVRLQNNKFSGELPSRLTQLSQVYLLDISRNQLSGRIDDRPWNMSSIQMLNLANNNFTGELPITFGSTKLEKLDLSENRFSGYIPLRFGSLSELMQLNLSNNKLYGEIPQELTFCKKLVLFDVSSNQLAGQIPTSLGDMPVLSLLDLSDNQLWGQIPGNLGRVESLVQVNISHNHFHGHLPATGAFLAINASAVTGNDLCGGSGNTSSGLPPCQKSDTNTWFVVLWFVVGLAGFALAAFLVTCSRRRKSSELKRVESEDGTWEIQFFHSKFAKSITRDDVLSSAKAGNVISKGKNWVSYEGKCMASGMQFEVKEIRDLNSVPLSFWEDMAELGKVRHPNIFKLMALCRSGKGAFLVYEDPEGESLSQVVRNLSWERRRKIAVVIAKALKFLHAQCSSVILVGELSPESVFIDRNDIPRLKLSPPALLKGSISSPYVAPEARNGTEVTEKSDVYGLGVILIELLTGRSAGMEDGSIVEWARYCYSDCHWGTWVDPTMKDGKQNGVVETMNLALNCTAMDPTARPCASDVFKALSAVTCTHTALCVSALQP 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1603 1003 ProSiteProfiles Leucine-rich repeat profile. 404 426 IPR001611 GO:0005515
Lele27g1603 1003 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 362 663 - -
Lele27g1603 1003 ProSiteProfiles Leucine-rich repeat profile. 124 145 IPR001611 GO:0005515
Lele27g1603 1003 ProSiteProfiles Protein kinase domain profile. 738 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1603 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 184 276 - -
Lele27g1603 1003 Gene3D Ribonuclease Inhibitor 278 353 IPR032675 -
Lele27g1603 1003 SMART LRR_typ_2 404 426 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 282 305 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 354 377 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 545 569 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 498 521 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 165 188 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 234 258 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 306 330 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 593 617 IPR003591 -
Lele27g1603 1003 SMART LRR_typ_2 378 402 IPR003591 -
Lele27g1603 1003 Gene3D Transferase(Phosphotransferase) domain 1 815 997 - -
Lele27g1603 1003 SUPERFAMILY Protein kinase-like (PK-like) 733 986 IPR011009 -
Lele27g1603 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 277 361 - -
Lele27g1603 1003 Pfam Leucine rich repeat 523 582 IPR001611 GO:0005515
Lele27g1603 1003 Pfam Leucine rich repeat 284 341 IPR001611 GO:0005515
Lele27g1603 1003 Pfam Leucine rich repeat 379 439 IPR001611 GO:0005515
Lele27g1603 1003 Gene3D Ribonuclease Inhibitor 188 277 IPR032675 -
Lele27g1603 1003 Gene3D Ribonuclease Inhibitor 74 187 IPR032675 -
Lele27g1603 1003 SUPERFAMILY RNI-like 124 422 - -
Lele27g1603 1003 Gene3D Ribonuclease Inhibitor 354 675 IPR032675 -
Lele27g1603 1003 Gene3D Phosphorylase Kinase; domain 1 706 812 - -
Lele27g1603 1003 PRINTS Leucine-rich repeat signature 405 418 - -
Lele27g1603 1003 PRINTS Leucine-rich repeat signature 545 558 - -
Lele27g1603 1003 SUPERFAMILY L domain-like 377 636 - -
Lele27g1603 1003 Pfam Leucine rich repeat N-terminal domain 78 115 IPR013210 -
Lele27g1603 1003 Pfam Protein kinase domain 752 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1603 1003 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 187 588 - -
Lele27g1603 1003 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 702 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1603 Lele-ChrLele27 21696499 21699754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1603 54 986 Receptor kinase-like Gene Family AT2G25790 53.403 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele27g1603 Pkinase 4.7e-15 CL0016