Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1602 ATGAGAACGAGTCCGCGCCAATCTCGACTGCGAACATCACGAGGAAACTTTGACGGGATGATGGCGGTGAGCTCGTCCTTCAAAGATGGGAGCAAGGTGGCAATGGATAACGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCTCTGGAGAGGCTGTATCACGATTGCCCCAAACCAAGTTCCATTCGCCGTCAGCAGCTTATCAGGGAGTGTCCCATTCTCTCCAACATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGAAAAGAAGCCTCACGGCTGCAAGCAGTAAACAGAAAACTGTCGGCTATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCACAGCTGGTTTACGAGAACAGCTTTTTCCGGCAACAGACTCGGAATACGACTCTGGCAACCACGGACGCAAGTTGCGAGTCGGTGGTGACGAGCGGTCAGCAGCAACATTTGACACCTCAGCATCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCAGAGGAGACTCTTGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCCCGTGCATGCGGCCTTGTGGGTCTGGAACCTACTAGGGTCGCTGAAATCCTCAAAGATCGGCCCTCATGGTGTCGTGATTGCCGAGCTGTGGATTTTCTAAATGCCATGCCCACTGGAAATGGGGGAACCATTGAACTGCTTTACATGCAGTTGTATGCCCCTACAACTTTGGCTCCAGCTCGTGACTTCTGGCTGCTGCGTTACACTTCAGTTTTGGAGGATGGTAGTCTCGTGGTCTGTGAAAGATCGCTTAACAACACTCAGAATGGTCCTACTATGCCACCAGCGCAGCATTTTGTGAGAGCAGATATGCTGCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGATCACGTCAACTTAGAGCCTTGCAGTGTACCTGAAGTGTTACGCCCACTATATGAGTCATCAACGTTGCTTGTTCAAAAGACAGCTATGGCGGCTTTACGTCATTTGAGGCAAATCTCTCAAGAAACTTCTCAGCCGAATGCCACCGGATGGGGAAGAAGGCCTGCAGCTTTGCGAGCACTGAGTCAGCGTTTGAGCAGGGGCTTCAATGAAGCTGTCAATGGATTTGCAGACGATGGCTGGTCCATGTTAGAAAGCGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCTCCTAGCAAGACCATGGGGGTAAATATCGGTTACAACAATGGGTTTCTTCCGATGAGCAGTTCCGTTCTATGTGCAAAAGCATCCATGTTGTTACAGAATGTGCCTCCTGCAATTCTTCTTAGATTCTTGCGGGAGCATCGATCGGAGTGGGCAGACAGCAATATTGATGCTTACTCTGCCGCTGCCATCAAAGCTGGTCCCTGTACCTTGCCTGGGGTTCGAGCAGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTGGCGCACACAATTGAGAATGAAGAGTTTATGGAGGTCGTCAAGCTTGAAAATATGGGATACTATAGAGAAGACATGACTATTCCGGGTGATATTTTCCTTTTGCAACTTTGTAGTGGAGTAGATGAGCGTGCTGTTGGCACCTGTGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCACCCATTTTACCTTCTGGTTTCCGCATCATACCTCTTGATTCAGGCATGGATGCTGCTACTCCGAACCGAACACTTGATCTTGCTTCTGCTCTTGAAGTTGGAACCACTGGAAACAAATTAGCTGGTGATAATCCTGGACAATCTGGGAGCACAAAATCTGTGATGACAATAGCATTTCAGTTTGCATGTGAAGTCCATCTTCAAGATAGTGTAGCAGCCATGGCTCGGCAATATGTTCGGAGTATTATTGCATCTGTTCAAAGGGTAGCATTGGCACTATCACCTTCCCACTTTGGTTCCCAAAATGGCCTTCGCCCACCACCTGGCACTCCTGAGGCTCAAACACTTGCTCAATGGATCTGTAATAGCCATGGGAGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAATTCCCTTTGGCATCACTCTGATGCAGTCTTGTGCTGCTCTTTGAAGGCTTTGCCGGTTTTCACATTTGCAAATCAAGCGGGACTTGACATGCTCGAGACAACTCTGGTTGCTCTTCAAGACATCACTCTTGATAAAATTTTCGACGAGAATGGGAAGAAAACCCTGTTCTCTGAGTTCCCCCAGATCATGCAGCAGGGCTATATGTGTATGCAAGGAGGTATCTGCTTGTCCAGCATGGGAAGGCCAGTGTCTTATGAGAGAGCGGTTGCATGGAAAGTAATGAACGAAGAAGAAACGGCCCATTGCATTTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2580 0.4864 MRTSPRQSRLRTSRGNFDGMMAVSSSFKDGSKVAMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENSFFRQQTRNTTLATTDASCESVVTSGQQQHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDFLNAMPTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADMLPSGYLIRPCEGGGSIIHIVDHVNLEPCSVPEVLRPLYESSTLLVQKTAMAALRHLRQISQETSQPNATGWGRRPAALRALSQRLSRGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKTMGVNIGYNNGFLPMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAHTIENEEFMEVVKLENMGYYREDMTIPGDIFLLQLCSGVDERAVGTCAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDAATPNRTLDLASALEVGTTGNKLAGDNPGQSGSTKSVMTIAFQFACEVHLQDSVAAMARQYVRSIIASVQRVALALSPSHFGSQNGLRPPPGTPEAQTLAQWICNSHGSYLGVELLKCEGSESILNSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLDKIFDENGKKTLFSEFPQIMQQGYMCMQGGICLSSMGRPVSYERAVAWKVMNEEETAHCICFMFINWSFV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1602 859 CDD bZIP 91 130 - -
Lele27g1602 859 FunFam Homeobox-leucine zipper protein REVOLUTA 39 94 - -
Lele27g1602 859 SMART HOX_1 36 102 IPR001356 GO:0003677
Lele27g1602 859 ProSiteProfiles 'Homeobox' domain profile. 34 98 IPR001356 GO:0003677
Lele27g1602 859 Pfam Homeodomain 39 97 IPR001356 GO:0003677
Lele27g1602 859 Gene3D - 218 401 IPR023393 -
Lele27g1602 859 ProSiteProfiles START domain profile. 174 402 IPR002913 GO:0008289
Lele27g1602 859 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 35 859 IPR044830 GO:0003700
Lele27g1602 859 SMART START_1 183 393 IPR002913 GO:0008289
Lele27g1602 859 Pfam START domain 184 392 IPR002913 GO:0008289
Lele27g1602 859 Coils Coil 94 135 - -
Lele27g1602 859 Pfam MEKHLA domain 718 858 IPR013978 -
Lele27g1602 859 CDD START_ArGLABRA2_like 178 393 - -
Lele27g1602 859 CDD homeodomain 39 99 IPR001356 GO:0003677
Lele27g1602 859 SUPERFAMILY Homeodomain-like 38 102 IPR009057 -
Lele27g1602 859 SUPERFAMILY Bet v1-like 183 395 - -
Lele27g1602 859 Gene3D - 30 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1602 Lele-ChrLele27 21683856 21691271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1602 35 859 Homeobox Transcription Factor Family AT4G32880 80.217 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele27g1602 START 6.8e-51 CL0209