Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1589 ATGGGCAAGTTTCCAGGAATCCGGAAAAAATGGACCCTTATCCAATTCCTTTTCCCAAACAAAAGTTCACCCCATATTGCAAAGGCCTACTATTCGTTCTGGGAGTTCCCTGATCGGTTCGATTTTCGGGGAAGGAGAGAAGCGCTATTAATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGTCGGAAGATAGGTAGCGGCTCCTTCGGCGAAATTTATATTGCTGCCGATATTCAGACATCTGAGATTGTAGCCGTGAAGATGGAGAGCAAGAAGACTAAACACCCACAACTACTGTATGAGGCCAAGTTATATAACGCCCTTCAAGGAGGAAGTGGTGTTCCAAGTATGAAATGGTATGGTATTGATGGAGACAATCACGTCATAGTTATGGATCTTTTGGGACCAAGTCTCGAGGATCTTTTTGTATACTGCGGGGGGAAGTTTTCATTAAAAACAGTTTTGATGCTGGCTGATCAGATGCTTGCAAGGATAGAGTATTTACATTCAAAGGGATTTTTGCACAGAGACATCAAACCAGATAACTTCCTTATGGGTCTAGGGAGAAAAGCAAATCAGGTTTATATGATTGATTTTGGACTTTCAAAAAGATACAAGGATCCTACAACCAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGAACTGCCCGTTATGCGAGTTGCAATACTCATTTGGGAATTGAGCAAAGTAGACGGGATGATTTGGAATCTCTTGGTTATGTTATTCTTTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTAAGAGCTGCCACTAAAAAGCAAAAATATGACAAGATCTGTGAGAAGAAATTATCCACTTCAATCGAGATCCTCTGCAAGTCTTATCCTGTGGAGTTTGCTTCTTACTTCCATTATTGCCACTCTTTGACATTTGATCAACGCCCGGATTATGGATTCTTGAAGCGCCTGTTTCGTGATTTATTTACTCGTGAAGGATACGAGTCTGACTACATATTTGACTGGACCATTCTTAAATGTCAGCAATCACAACAGACAAAGATGAAGGATCAATCAACTCCTGCTGCTGCTGATGTGCCTAGCCGTGTTGAACCAAATGTTGTAGATAAGAATAAAGGTGTCAACGGTTCTGCTCAAATCGCGGTGGCAAGACCATTAACAAATGTTAACGCACGCGTTAATATGCAGATCAGATCATCACGTGATGATAAGAATCTGAATGCAGAGAATCAGATTGTGAAACTTCCCGTGAAAATGGGTCCATCTACATCCGCGAGGCCCAGAGTGCCAGAAAATGTGTCAAAAGCAGAGAAACCAATGGAAAGCTCAAACCCAGGTCGAGTATTTGGGCATAACAGCGGCACTTCAAGCAGCCGGATTCCTTCACTACGCAGAATTTCTTCGGCCAAAAAATAG 1431 0.4214 MGKFPGIRKKWTLIQFLFPNKSSPHIAKAYYSFWEFPDRFDFRGRREALLMERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAVKMESKKTKHPQLLYEAKLYNALQGGSGVPSMKWYGIDGDNHVIVMDLLGPSLEDLFVYCGGKFSLKTVLMLADQMLARIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLSKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVILYFLRGSLPWQGLRAATKKQKYDKICEKKLSTSIEILCKSYPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREGYESDYIFDWTILKCQQSQQTKMKDQSTPAAADVPSRVEPNVVDKNKGVNGSAQIAVARPLTNVNARVNMQIRSSRDDKNLNAENQIVKLPVKMGPSTSARPRVPENVSKAEKPMESSNPGRVFGHNSGTSSSRIPSLRRISSAKK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1589 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Lele27g1589 476 Gene3D Transferase(Phosphotransferase) domain 1 45 385 - -
Lele27g1589 476 SUPERFAMILY Protein kinase-like (PK-like) 54 340 IPR011009 -
Lele27g1589 476 PANTHER CASEIN KINASE-RELATED 57 385 - -
Lele27g1589 476 MobiDBLite consensus disorder prediction 451 476 - -
Lele27g1589 476 MobiDBLite consensus disorder prediction 424 476 - -
Lele27g1589 476 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Lele27g1589 476 SMART serkin_6 59 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1589 476 ProSiteProfiles Protein kinase domain profile. 59 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1589 476 FunFam Casein kinase I isoform delta-like 51 390 - -
Lele27g1589 476 Pfam Protein kinase domain 60 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1589 Lele-ChrLele27 21618510 21624367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1589 58 263 EF-hand Containing Proteins AT2G17890 28.837 9.63e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele27g1589 Pkinase 4.2e-28 CL0016