Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1575 ATGCGTATGTATAACTTCGATCGTTTCATCGTTTCTCAGTTACTCGGGCTACTCGCCCGCTCGCATTCTGAAGCTCAACTCGGTGAGTGTTCTTCATTCTTCCTCTCATTAGACGAGTCAGCGCTGGAAATCCTTGGTTCCATCTTCAAATTCTTAGAAATGGACAACTCCAACTTTTTGGTTTTTGGATACCGAATACTCATATTTCAGTATTTTGTGTTTTCTTTTATTCGTTCTGTGATGGGGCAAGGGGAGGAGCGCACAACTTTGGCGCACACCATTTTCAGGTGGCATAATCATCTTAATCCTACTATAAACAAGCAAGCGTGGACCTATGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAGATTTTCGGGAACAGATGGGCAGAATTGACAAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCAGTAAAAAAGAAATTGGATTCTTACTTGGCATCTGGTTTGCTTACTCAATTCCAAGATGTACCCCTTGTTGGACATCCAAATCAACCGGTGGTTTCTACGTCTTTGAGGCGGCAGTGTAGTGGAGATGATAATGGTTATAAGGGCACTGAAGGAGCGGAAGTTTCTGAGTGTAGCCAAGAGTCAGCTAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACCAATGCTGTATTAAATACTACAGAGGAACTAAAGCCAAGTGAAGATATCAGTCTGGGAAAGGAGCACAGTCCTAGTCAAGCATCTTGTCTAGATCCATATTGCATATCTCTGGATGACGTTACAATATCCATTCCGGACGTTGCTCATGAAGATGCTTCTTGTTCTGATTTCCTTGAACAAGCATACCCACATGGTCGTGGAAATTCTGCGAGCAGTGATACTCAGTTTACCTTACATGCCCTCCCTAACGTTTGTTCATCAGACTTGGATCAAGAATGTTCACTTCTGCAAAGGGACAGTGCAGATTGCGTTGAAAGCCATGACATTGTAAGTGTTCCATTGCATACTTCAGCAGGATTAGGTATTTCAACATCCATGGGACCCCCGTCTATAGATCCCGCGAAACAAGACCACATGTTAATATCTAGTGAAGAATGTTATAGAGTCCTATATTCAGAGGCAGTAAATGATGGATGCTTTTCTTCAGGAGATTATAACAAAAATGTTAATACAGTTTCATCCGGATGCATTGCATTATTTGGCCAATCATCTGACCTCCATATACCTGAGACTGGTGGAACCTCAAATTCATTCCAAACTTGTCCCGTAAAATCTAATGATTTAATAGGATCTTCATTCTCTCAATCTCCAATGCTGTCTGCTAATGATGGTAGATTAGTGTATACAGCTGAACCCAATCATCTAGTTGGTGCTGATGATCTACGATTTGTCTCCAGAGCTCAGGATAGCTTCATTTATGCTAACAACTCATCCGTTGCTCCTTGTATGGATGCTATAAATAATGGGGAAATGCAAGAGGGACAAGATACTGTGAAGGATGCTTCAAGATTGGTACATGTAAATACATTTGGCAGTGCATCAGATGCCAAGCGTACATGTCCAATAGAAGAAAGGATAGGTGTGCATATAGAACAGTTAGAGACCGGAGCTCTATGTTATGAACCGCCTCGATTCCCAAGTTTGGATATCCCCTTCTTAAGCTGTGATCTTATACAATCAGGGGGGGATATGCAACAAGAATTTAGTCCACTGGGTATCCGCCGGCTTATGATGTCATCTATGAACTGTCCAACTCCCCTGAGGCTGTGGGATTCACCTTCCCGTGGTGATAGCCCAGATGCTTTGTTGAAAAGTGCTGCTAAAAGTTTCACTGGTACACCATCCATATTGAAGAAACGACACCGAGACTTGTTGTCGCCTCTATCAGATAAGAGACTCGACAAGAAACTTGAGACTGACTTGACGTCCACGTTGGCTACACATTTTTCACGTTTGGAAGTCATGTTTGTTGATAATGTGACTCGGGAAGTAGATATGCCTTCTCAACCTTTAATGGAGAAAGAGAAATCTGGAGCAACTGCCGAGGATACCAAAAATTGTGGACAAACTTTGAAAGGAGAACATGCAGATCGAAGAAATGAATCTACACTTGGCCACAAAAACAAAGAAAAAGAGACAGCTGACAGCGATCCTCAGGATTTCCAACGACCTTCTTACTATGATTCGAAGATGAAGGTTGATTGTGACCTCGATAAAGCCGTTGAGATTGTGGAACAACCTTCTGGAGTCTTGATTGAACATGATATGAATGACTTGCTATTATATTCTCCTAATCAAATGTGTTTCAAATCAGACAGAACTCACTGTTCAAGTGCTAAAACTCCAAAAAACATGAACAGAAGTTTGAAAGCATCTTTAAATAAGAGCATTTCTTCACATCCATGCCCAAGTGATAGCTCCCCTTCTGTTCGTGTAAAAAATCTAGACGTTTCTTCATTTCCTGTTACTTGCGTATCATCTCTCTGTTCATCAGCACTTGCCGAGAACCTTGGTGATCATCCCGGAAATGATGCTGGTTTTGACACATTTAACAATAAGAAACCTAACTGTATAGTGTTTGCTACCAGTTTTGGCGGAACACCTTTTAGAAGAAGCATCGAATCACCTTCAGCATGGAAGTCTCCCTGGTTGATGAACACTTTCTTGCCAAGCCCAAGACTTGATACTGAAATAACAATCGAGGAGATTTTGGAAAGTGTAACTCCCAAAGCTAAAGATTCATCTGGAATCAGGGACAGAGACCAGGAAAGCAAGGATAATCTTGATCAGCCCGTGAATCATTCTCATGTGCCCCGAAATGCTTTGGTAGAGCGACGCATACTTGATTTCAGTGAGTGTAAAACACCAGGGAAGGAGGGCAGCGGCAAAGGCTCTGCTCAGACCTTCTCAAGCCCTTCGTCATATTTGTTGAAGGGATGTAGATAG 2961 0.4222 MRMYNFDRFIVSQLLGLLARSHSEAQLGECSSFFLSLDESALEILGSIFKFLEMDNSNFLVFGYRILIFQYFVFSFIRSVMGQGEERTTLAHTIFRWHNHLNPTINKQAWTYEEELALVRAHQIFGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFQDVPLVGHPNQPVVSTSLRRQCSGDDNGYKGTEGAEVSECSQESANVSCFPSARDMTNAVLNTTEELKPSEDISLGKEHSPSQASCLDPYCISLDDVTISIPDVAHEDASCSDFLEQAYPHGRGNSASSDTQFTLHALPNVCSSDLDQECSLLQRDSADCVESHDIVSVPLHTSAGLGISTSMGPPSIDPAKQDHMLISSEECYRVLYSEAVNDGCFSSGDYNKNVNTVSSGCIALFGQSSDLHIPETGGTSNSFQTCPVKSNDLIGSSFSQSPMLSANDGRLVYTAEPNHLVGADDLRFVSRAQDSFIYANNSSVAPCMDAINNGEMQEGQDTVKDASRLVHVNTFGSASDAKRTCPIEERIGVHIEQLETGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRGDSPDALLKSAAKSFTGTPSILKKRHRDLLSPLSDKRLDKKLETDLTSTLATHFSRLEVMFVDNVTREVDMPSQPLMEKEKSGATAEDTKNCGQTLKGEHADRRNESTLGHKNKEKETADSDPQDFQRPSYYDSKMKVDCDLDKAVEIVEQPSGVLIEHDMNDLLLYSPNQMCFKSDRTHCSSAKTPKNMNRSLKASLNKSISSHPCPSDSSPSVRVKNLDVSSFPVTCVSSLCSSALAENLGDHPGNDAGFDTFNNKKPNCIVFATSFGGTPFRRSIESPSAWKSPWLMNTFLPSPRLDTEITIEEILESVTPKAKDSSGIRDRDQESKDNLDQPVNHSHVPRNALVERRILDFSECKTPGKEGSGKGSAQTFSSPSSYLLKGCR 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1575 986 FunFam Transcription factor MYB3R-2 108 170 - -
Lele27g1575 986 MobiDBLite consensus disorder prediction 914 943 - -
Lele27g1575 986 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Lele27g1575 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 156 IPR017930 -
Lele27g1575 986 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Lele27g1575 986 MobiDBLite consensus disorder prediction 671 730 - -
Lele27g1575 986 MobiDBLite consensus disorder prediction 958 986 - -
Lele27g1575 986 MobiDBLite consensus disorder prediction 914 937 - -
Lele27g1575 986 CDD SANT 109 149 IPR001005 -
Lele27g1575 986 MobiDBLite consensus disorder prediction 693 723 - -
Lele27g1575 986 PANTHER MYB PROTEIN-RELATED 96 243 - -
Lele27g1575 986 Gene3D - 108 163 - -
Lele27g1575 986 SUPERFAMILY Homeodomain-like 94 157 IPR009057 -
Lele27g1575 986 SMART sant 106 154 IPR001005 -
Lele27g1575 986 MobiDBLite consensus disorder prediction 966 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1575 Lele-ChrLele27 21531086 21536846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1575 96 986 MYB Transcription Factor Family AT4G32730 36.170 5.50e-135 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g1575 Myb_DNA-binding 1.4e-12 CL0123