Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1554 ATGTCCATGGATTCAAAGAAGTCTAACAAGATCACAGAAATTGTTAGGCTTCGGCAGATCCTCAAGAAATGGAGAAGTGTGGCTAGCTCTTCAAAAACAACCATCACCACCACCACCACAAGCAGCAGCAGTAGTAAAAGCATCAAGTTTCTGAAAAGGACACTTTCTTTATCTGAACGTGAAGGAGGGTCAAGCAATTTTGTTCCCAAGGGATATCTGGCTGTTTGTGTTGGGGAAGAGCTACAGAGGTTCATTATACCCACTGAGTATTTGGGTCATCAGGCCTTCCACATGTTACTGAGGGAAGCAGAAGAAGAATTTGGGTTTCAACAGACCGGTGTTCTGAGGATCCCTTGTGAGGTATCTGCCTTCGAGAGCATATTAAAGATGATAGAGGGAAAGAAGGACAAGGTTTCCACTCAAGTTTTCCACTCAACAGACAGGTGCTCTGAGGACATGCTTTCTTGTTCCCACCATCCTCACAGTCCAATGTGTAGATAG 501 0.4451 MSMDSKKSNKITEIVRLRQILKKWRSVASSSKTTITTTTTSSSSSKSIKFLKRTLSLSEREGGSSNFVPKGYLAVCVGEELQRFIIPTEYLGHQAFHMLLREAEEEFGFQQTGVLRIPCEVSAFESILKMIEGKKDKVSTQVFHSTDRCSEDMLSCSHHPHSPMCR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1554 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 127 IPR003676 GO:0009733
Lele27g1554 166 Pfam Auxin responsive protein 23 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1554 Lele-ChrLele27 21376054 21376554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1554 3 166 Calmodulin-binding Proteins AT2G24400 54.645 2.09e-56 173