Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1547 ATGGCTCACCACAGAGCCTATCATGGGCTTCTCGTCTCGCTCATCAGCTTCTTCGTTCTATTCATCTGCTTTGTGCCATGTTTGGGTGATGACCCTCAGGTTCTGATCAAGTTCAAGAGCTTCTTGTCCAATGCCGATGCCTTGTCCAACTGGAACGACTCTGTAAACATCTGTAACTGGAAAGGTGTCAAATGTCGCAAAGGAGGGTTTCACTTGATACTCGACAACATGGGACTGAGTGGCACTATTGATATTGATACCTTGTTGGAATTATCCAACTTGCAGTCCTTTAGCGCGAAGAACAACAGTTTTGAAGGTAACATGCCTGGTTTTAACAGGCTTGGGAGGTTGAAGGGGCTGTATTTGTCCCATAACAAGTTATCTGGAGACATTGCTGATAATGCTTTTGAGGGTTTGAAGTATCTGAGCAAGGTGTACTTGGCGGAAAATGAGTTCACGGGTCGTATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATTCGAATCATTTTGAGGGGAAGATACCAGAGTTTCGAACCAAAAATAAGTTCAGAGTTTTCAATGTATCCGACAACCTCCTCCAATGTGAAATCCCAGGAAGCATAAACAACGGCGATCCCAGCACATGTAATGGAAACAATCTATGTGGAAAACCTTTGGATAACCCCTGCAAAAAGTCCTCCTCGAGGAAGCGAGACATTCTTATAACTGCTATCGTAGTGGTGGTTGTGATATTATTATTGGCTTCAATTATAGCAGCTTTATTTGTTCTTCGTCGTCGTCGCAGGAGGCGAAGACGTTCTACTTCTAATTCTCAGACGAAAACTACTACGGTTCACCAAGGGCAACATCAAAACAGTGAACCCTTGGTAATTAAGGAGACTACTCCACCATCACTTGATCTGACAGCTGAATTCAGCAAGGGCGAGAACGGAGATTTGAACTTTGTTAACAACGACACACAGAGATTTGATCTGCAGGATCTTCTCAGAGCCTCAGCTGAAATTCTGGGCAGTGGTAGTTTTGCATCTACGTATAAAGCTATTGTTATGAACGGACCCGCCGTGGTGGTGAAGAGATTTAAACACATGAACAATCTCGGGAAAGAAGAGTTCTTTGAGCACATGACAAGACTTGGAAGCTTGAACCATGCTAACCTTCTTCCTCTTGTTGCCTTCTACTACAGAAAAGAAGAGAAGCTTCTGGTTTATGACTGGGCTGAAAATGGCAGCTTGGCCAGTCATCTCCATGGTAGGCGTGGTTCTGGTCTAGATTGGCCAACACGATTGAAGATCATAAAAGGAGTAGCGAGAGGATTAGCTTACCTCTACAGAGAATTCCCAGATCAAAAGCTACCGCATGGGCATCTAAAATCATCGAATGTTCTGCTAGATCAGTCAATGGAGCCTCATTTGACAGAGTACGGACTCGTACCAGTGATGAACAAGAGCCACGCTCAACAGTTCATGGCGGCGTACAAGGCCCCGGAGGGGAAGCAATCCGACGGACCCAACCAGAAGACCGACGTGTGGTGTTTGGGGATTCTGATTCTGGAACTTCTGACAGGGAAGTTCCCGGCGAATTACCTGCGACATGGGAAAGGAGCGAACTCGGACTTGGCCACGTGGGTGGACTCGGTGGTGAGAGAAGAGTGGACAGGGGAAGTGTTCGATAAGGATATTCTGGGTACGAGGGACGGTGAGGGAGAGATGCTAAAACTGTTGAAGATAGGAATGTATTGTTGTGAATGGGACGTGGAGAATCGGTGGGATTGGAAGGAGACGATGGCGAAGATTGAGGAATTGAAGGAGAAGGATAGTGAAGAAGATTTGTCTTCTTTTAATAACAGTGAAGCCGATGTTTCCTCCAACTAG 1890 0.4566 MAHHRAYHGLLVSLISFFVLFICFVPCLGDDPQVLIKFKSFLSNADALSNWNDSVNICNWKGVKCRKGGFHLILDNMGLSGTIDIDTLLELSNLQSFSAKNNSFEGNMPGFNRLGRLKGLYLSHNKLSGDIADNAFEGLKYLSKVYLAENEFTGRIPSSLAELPNLLDLDLHSNHFEGKIPEFRTKNKFRVFNVSDNLLQCEIPGSINNGDPSTCNGNNLCGKPLDNPCKKSSSRKRDILITAIVVVVVILLLASIIAALFVLRRRRRRRRRSTSNSQTKTTTVHQGQHQNSEPLVIKETTPPSLDLTAEFSKGENGDLNFVNNDTQRFDLQDLLRASAEILGSGSFASTYKAIVMNGPAVVVKRFKHMNNLGKEEFFEHMTRLGSLNHANLLPLVAFYYRKEEKLLVYDWAENGSLASHLHGRRGSGLDWPTRLKIIKGVARGLAYLYREFPDQKLPHGHLKSSNVLLDQSMEPHLTEYGLVPVMNKSHAQQFMAAYKAPEGKQSDGPNQKTDVWCLGILILELLTGKFPANYLRHGKGANSDLATWVDSVVREEWTGEVFDKDILGTRDGEGEMLKLLKIGMYCCEWDVENRWDWKETMAKIEELKEKDSEEDLSSFNNSEADVSSN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1547 629 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Lele27g1547 629 SUPERFAMILY L domain-like 71 209 - -
Lele27g1547 629 MobiDBLite consensus disorder prediction 276 293 - -
Lele27g1547 629 Gene3D Phosphorylase Kinase; domain 1 304 411 - -
Lele27g1547 629 Gene3D Ribonuclease Inhibitor 30 135 IPR032675 -
Lele27g1547 629 MobiDBLite consensus disorder prediction 609 629 - -
Lele27g1547 629 FunFam pollen receptor-like kinase 1 306 411 - -
Lele27g1547 629 SUPERFAMILY Protein kinase-like (PK-like) 340 604 IPR011009 -
Lele27g1547 629 Gene3D Transferase(Phosphotransferase) domain 1 412 627 - -
Lele27g1547 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 613 - -
Lele27g1547 629 FunFam Pollen receptor-like kinase 1 412 618 - -
Lele27g1547 629 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Lele27g1547 629 Gene3D Ribonuclease Inhibitor 136 230 IPR032675 -
Lele27g1547 629 ProSiteProfiles Protein kinase domain profile. 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1547 629 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lele27g1547 629 MobiDBLite consensus disorder prediction 268 293 - -
Lele27g1547 629 Pfam Protein kinase domain 339 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1547 Lele-ChrLele27 21341584 21344220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1547 10 607 Receptor kinase-like Gene Family AT4G31250 46.782 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g1547 Pkinase 1.6e-28 CL0016