Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1542 ATGTTAGCTCACAGAACTAAGTTTCAAGCAGGACGTGATAATAGGCGAAGCCTTGATGGACCATATAAATCGCAGGAAGAATCAGAATCCTTTAGGTCACCATTTACTAGGAGAGGTATGAATGGGAAGTCATATGGGGAACTTTCTGTACCAGATACTGACATATCCTTTGTGAGTTCTAGTGGAAGGCCAAGTACAGATCGCATGTTCCCTTCATTATTTGACACTGCAGATGCTGGATTCTCCAACCCTCGTTTATCATATAGCTCAGAACCAGATAACAATTATAGTTTCGAGACGGCCTCGCAGTTTGGGAGAAGGTCTGTGGAAATGGTTAGCCCTCCTCCTGAATTCTCATCAAATTCACAGGAAAGGGACAGACTTTCTTCTTCATCAGGCCTAGATGATGCGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAGCACAGCTTGTAAAGAAGCTCTCTCAGCAAAGCAGAAGGCAATAGAACTTCAGCGATGGAAGTTAGAGGAAGAGCGAAGATTAGAAGAGGCGAGGCTAGCAGAGGAAGCTGCATTGGCAATTGCAGAGAAGGAGAAGGCGAAATCCAAAGCAGCTCTTGAAGCTGCTGAGGCACAAAAGAGAATAGCAGAACTGGAAGCACAAAAGAGATTGAGTGCAGAAATGAAAGCACTCAGAGAAGCTGAAGAGAAGAAGAAAGCACTAGATGCTTTAGTAAATATAGATGTCAGGTATAGAAAGTACTCCATTGAAGACATTGAATCGGCAACACAGTTCTTCCAAGAGTCACAGAAAATTGGAGAAGGTGGTTATGGTCCAGTCTACCATTGCTTTCTGGACCATACACCTGTTGCAGTTAAAGTTCTTCGTCCAGATGCAGCACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTACTGAGTTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCAGAATATGGATGTCTTGTATATGAATTCATGGCTAATGGAAGCTTGGACGATCGTCTGTTTCGCCGAGGAAACACTCCATCACTTTCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATAGGCACTGGCTTATTGTTCCTTCACCAGACAAAACCAGAGCCTCTGGTTCACAGGGATTTGAAACCAGCTAACATCTTACTTGACCGAAACTACGTAGCCAAGATCAGTGACGTAGGTTTGGCCAGGCTGGTCCCACCATCTGTAGCCGACAATGTCACACAATACCGTATGACATCCGCTGCTGGAACTTTCTGCTACATAGATCCAGAATATCAGCAAACAGGAATGTTGGGGGTAAAATCAGACATATATTCCCTTGGGATCATCTTCTTGCAGATAATAACAGCAAGACCGCCAATGGGTTTGACTCATCATGTTGAAAGAGCCATTGAAAAGGGAACATTCAAGGAGATGTTGGATCCAACGGTGCCTGATTGGCCAGAAGAAGAGGCCTTGAATCTTGCAAATTTGGCTCTAAAGTGTGCAGAGTTAAGGAGGAAAGATAGGCCTGATCTGGGAAAAGTCATATTACCAGAACTAAACAGAATGAGAATGCTTGCTGAAAGTGCTGATCACCATTTAATTATGAGTGGCTATTTAAGCCCTCCCAATCTGGGCCTAGCTTCAATGCCAGTGGTATGTTTTGAATTTTCTATCAAAGTTTTTTTCTTGCCAAAAAAATCAGTTTTTGTAGTTTATTCACAATGTGTTTTTGTGGGGTGTGGTTGGCCAGGTTCAATATCATCCCAGTTCCACAGGTTACTCTGGGGAGGGCACAAGAAATAG 1839 0.4383 MLAHRTKFQAGRDNRRSLDGPYKSQEESESFRSPFTRRGMNGKSYGELSVPDTDISFVSSSGRPSTDRMFPSLFDTADAGFSNPRLSYSSEPDNNYSFETASQFGRRSVEMVSPPPEFSSNSQERDRLSSSSGLDDAEAEMRRLKLELKQTMEMYSTACKEALSAKQKAIELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLSAEMKALREAEEKKKALDALVNIDVRYRKYSIEDIESATQFFQESQKIGEGGYGPVYHCFLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDRLFRRGNTPSLSWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQIITARPPMGLTHHVERAIEKGTFKEMLDPTVPDWPEEEALNLANLALKCAELRRKDRPDLGKVILPELNRMRMLAESADHHLIMSGYLSPPNLGLASMPVVCFEFSIKVFFLPKKSVFVVYSQCVFVGCGWPGSISSQFHRLLWGGHKK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1542 612 PANTHER OS02G0152300 PROTEIN 25 548 - -
Lele27g1542 612 Pfam Protein kinase domain 268 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1542 612 FunFam U-box domain-containing protein 51 341 541 - -
Lele27g1542 612 Gene3D Transferase(Phosphotransferase) domain 1 341 546 - -
Lele27g1542 612 Coils Coil 134 154 - -
Lele27g1542 612 MobiDBLite consensus disorder prediction 106 136 - -
Lele27g1542 612 MobiDBLite consensus disorder prediction 53 67 - -
Lele27g1542 612 MobiDBLite consensus disorder prediction 1 71 - -
Lele27g1542 612 MobiDBLite consensus disorder prediction 114 128 - -
Lele27g1542 612 SMART serkin_6 268 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1542 612 Gene3D Phosphorylase Kinase; domain 1 247 340 - -
Lele27g1542 612 MobiDBLite consensus disorder prediction 8 33 - -
Lele27g1542 612 ProSiteProfiles Protein kinase domain profile. 268 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1542 612 SUPERFAMILY Protein kinase-like (PK-like) 251 526 IPR011009 -
Lele27g1542 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Lele27g1542 612 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 240 340 - -
Lele27g1542 612 Coils Coil 160 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1542 Lele-ChrLele27 21325161 21327574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1542 37 541 Receptor kinase-like Gene Family AT5G35380 66.864 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele27g1542 Pkinase 4.3e-41 CL0016