Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1508 ATGGCAACCTTGCAATTTTTGGACCCCGGTTTTGCAATTGTGGAAGGGCCCCTCTTGTGTGCTTTTCTGGGCTCTCTTGGAGAAACACCACGGTTTTTCGAGATAATGTTGAGGAAGAGAACCAGGTCACTCCAGAAGGATCAACACCTCATGGGTCATGTAGCAAACCCAGATGCTAATTCGGACTACTATTCTCAGTCTCAATCACTGGGGAGAAACATCAAAAGCAATTCAATTTTTAATGCTCCTCGTGTGTTCGTAGGTCTGGGTCCTAAGGGCTTACTAGATTCTGATTCAGTTAGGAGCCCAAGATCTCCACTTGATGTTAGGGTTCTGTCAAACTTAGGAAACGCAGTTAGAACCCAAAGATCATCTCCCCATGAGGGGAATCAAAGGAGCTGGGAATGCAGCAAAGTAGGCCTAAGCATAATAGATTCTTTGGAAGATTGTCCTAAATTTTCTCGGAAAATTCTCCGACCATCAGAGAGTAAGAATCTTAGTGTCAGTCCAAGAATGAGGGTGAAAGTCCCAAATTGTCAAGCCTATACTGATTCTTTTGAGGCATCTAAATCCTTACCCAAGGATTTTTGTAAGCCTCCTTATAGCAAGGGTGGGTCTATTTCTGTCAAGGGTGAGTCAAAAGTTCTTTTTGAAATTGGAGAAACCCACCCAGAGATTGAGCCATTTGGGAAAAGTATGTCTTGTTCCTTGGACTTCTGCAGTCCATTGAAAACGATTTCTGGTTTAACTCATTCGAACATTGATTCGAACTCTGGGATTACTATGAAAAATATGATCCACCAAATTGGCTCTCCTCCTCATTTTAGCGGAGGAAGCCATAACTCAAGCACCTTATCTCATACAGAATTCAATGCAAAATTTTTATCCATGTGCACATCAAATGAATTTATTGGGTCCTTATCTGCTGGTGAGATTGAACTTTCTGAGGACTACACATGTGTAATTTCCCGTGGTCCTAATCCAAAAACTACTCATATTTTTGGAGATTGCATCCTGGAAACTCATTCTACTGGTTTTGGAAACCATAGTAAGAATCAAGAGGGCGATAATGGAGTGCTGCCCAATGTGGCTAACAGCTTACAAACTACAAACCAATATCCCTCTAGTGACTTCTTGAGTTTCTGTTACCATTGTGACAAGAAACTGGAAGAGGGCAAAGATATTTATATATATAGAGGGGAACAGGCTTTTTGCAGTTTAAGTTGCCGTGCTCTGGAGATCATGATTGACGAGGAACTTGAGAAGAAATCAAATCCATCTTCTGGAAATTCTTCTTCAAAACCAGAAAATAGTGAGGAATTTCTTCAAACTGGCATTTTCACAGCCACCTAG 1353 0.4132 MATLQFLDPGFAIVEGPLLCAFLGSLGETPRFFEIMLRKRTRSLQKDQHLMGHVANPDANSDYYSQSQSLGRNIKSNSIFNAPRVFVGLGPKGLLDSDSVRSPRSPLDVRVLSNLGNAVRTQRSSPHEGNQRSWECSKVGLSIIDSLEDCPKFSRKILRPSESKNLSVSPRMRVKVPNCQAYTDSFEASKSLPKDFCKPPYSKGGSISVKGESKVLFEIGETHPEIEPFGKSMSCSLDFCSPLKTISGLTHSNIDSNSGITMKNMIHQIGSPPHFSGGSHNSSTLSHTEFNAKFLSMCTSNEFIGSLSAGEIELSEDYTCVISRGPNPKTTHIFGDCILETHSTGFGNHSKNQEGDNGVLPNVANSLQTTNQYPSSDFLSFCYHCDKKLEEGKDIYIYRGEQAFCSLSCRALEIMIDEELEKKSNPSSGNSSSKPENSEEFLQTGIFTAT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1508 450 MobiDBLite consensus disorder prediction 422 450 - -
Lele27g1508 450 PANTHER FCS-LIKE ZINC FINGER 11 36 449 IPR044585 -
Lele27g1508 450 Pfam zinc-finger of the FCS-type, C2-C2 371 419 IPR007650 -
Lele27g1508 450 ProSiteProfiles Zinc finger FLZ-type profile. 377 421 IPR007650 -
Lele27g1508 450 MobiDBLite consensus disorder prediction 425 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1508 Lele-ChrLele27 21052461 21059285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0573 25 3644981 3646486 Lele27g1508 27 21052461 21059285 hybridization
Lele26g0587 26 3765049 3766549 Lele27g1508 27 21052461 21059285 hybridization