Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1495 ATGGAGCCGGCAGGGCACTTGAACAGTAGTCAGTACGTCATTGACATCTCTGGGAGTATTGATGCTTCAACATCATCAACTTCACCTCACGATAGATATATTAGTAACATAGATGCATCCGAGCATGGAATAGGCCCTACAAGTGCAGGATTCCCTGTTTCTCAGCAATCAGTTTCTCTCTCTAGTGTAAGCCAGATTGTTGCATCTACTATTGTTTTATCTTTATCAAGGCATGAGCATCCAAGCACTCCATTGTTTGCATGGATCGTTGGTTATGCCAGTGGTTATGTTGCTATCCTTCCTCTGCTCTGTTGGCGGTATTACTATTGTAACCAGATTCAAGAGCAAGATTCATCTCATCTGGGTGAGACTTCTCAGGCGAATGTTTCTTCAAGGACCTATCATTCTGTTGCTAGACCAGTGGACAAGAGGACGATCAGGCTACTGCTGGGTCATCAACATTTGTGTTTAACTGATCTAGAAACACTTTTCATTGTGATGCTTTTTCCACCACTTGGCCTATTTTTCTATACAATTGAGTTCTTGACGTACTGTTTGGTGGTTATAAACATGGTACTTCGCAACTTGTTTATGAAGCTGCTAACTGCCTGTGCATACCAGCTAAGCAGACTGAAGAGACTAATGGAATACTTCAAAATGGCCTTAGATTGCTATTTTGCCGTGTGAGAAGATCAGGTACAAACCAGAGGGGCAACCGCTGAATCCATTAATGCCTTGCCAACATACAAATTTAAAATGAGAAGTAAAGACAATTCTAGCAACTCTGCTATTAGTGAAGGTGGCATTGTTGCTGCAGGAACTGAAAAGGAGCGTCTTATCTCTGGAGAGGATGCGCTTGTTGTGTTTACTGTTCCTGTACCATGGGAGCTCTCTGTCATAGGCGTAGCATCCATCCAATCAATTAATAAACGTTTGATTAAAGTACGGTGTTTTCTATCTCGTCATGAACTTTCAAGAATTACAGTGCATAAGTTTCAATCACTCACTTTCTTGCGATCAGTTGATATTCTGAAATCAACCAGATTTTGTGTCATGTGCTCTTATAAATGCATCTCTACCGAAGTCTTTGCAAGGGTGAGGCTGGCGAGGTCGAGGATGCCAGAGGATCATCAGGCTCCGTACAAGATGCAGGCCAGCGACTTCCTTCCTCTTTGCAAGGGTAAGGTTGGTGAGATCGAGAACGCAAGGGGATCATCACTCATCAGGCTTTGTAGAAGATGA 1242 0.4291 MEPAGHLNSSQYVIDISGSIDASTSSTSPHDRYISNIDASEHGIGPTSAGFPVSQQSVSLSSVSQIVASTIVLSLSRHEHPSTPLFAWIVGYASGYVAILPLLCWRYYYCNQIQEQDSSHLGETSQANVSSRTYHSVARPVDKRTIRLLLGHQHLCLTDLETLFIVMLFPPLGLFFYTIEFLTYCLVVINMVLRNLFMKLLTACAYQLSRLKRLMEYFKMALDCYFAVXEDQVQTRGATAESINALPTYKFKMRSKDNSSNSAISEGGIVAAGTEKERLISGEDALVVFTVPVPWELSVIGVASIQSINKRLIKVRCFLSRHELSRITVHKFQSLTFLRSVDILKSTRFCVMCSYKCISTEVFARVRLARSRMPEDHQAPYKMQASDFLPLCKGKVGEIENARGSSLIRLCRR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1495 413 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 60 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1495 Lele-ChrLele27 20962693 20965245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1495 46 285 C3H Transcription Factor Family AT1G80400 32.609 1.77e-30 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0585 25 3735379 3738097 Lele27g1495 27 20962693 20965245 hybridization
Lele26g0601 26 3834253 3837000 Lele27g1495 27 20962693 20965245 hybridization