Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1487 ATGGGATCTTACAAAGAACAACAACAAGAACAAGCTAAATGTGCTTGGGTTCATGGACCTATCATCATAGGCGCTGGTCCCTCTGGTTTAGCAGTCGCTGGTTGCCTCTCTCAACATGGCGTCCCCTGTGTTATTCTTGAGAAGAGTGACTGTTTAGCTTCTCTATGGAAACACAGAACCTACGACCGTCTCAAGCTTCACCTTCCCAAACACTTTTGTGAACTTCCCTTGATGGGTTTCCCTCCCAATTTCCCCAAGTACCCCACCAAATACCAGTTCGTTTCATACCTTGAGTCCTATGCTTCCCACTTCTCAATTGAACCCCGGTTCAATCAAACCGTCATGACTGCAGAGTTCGACCAAAGTTGCGGCTTTTGGACGGTTCGAACCCAGGATTTTGAATACATTTCCCGGTGGCTTGTAGTTGCCACTGGGGAAAATGCGGAGCCAGTGATTCCTAAGATTTCTGGAATGGAGTCGTTTCATGGACCGGTTGTTCATACTAGTCTCTTCAAGTCTGGTTCTGATTACAAGAACCAGAGGGTTTTGGTTATTGGGTGTGGCAATTCGGGCATGGAAGCAAGCTTGGATCTTTGCAGACACAATGCATTCCCTTCTATGGTCGCTAGGAACACTATACATGTTCTACCAAGGGAGATGTTTGGTTTCTCAACATTCGGAATAGCCATGGCCCTCCTTAAATGGTTCCCTTTAAGATTAGTAGACAAGTTTCTCCTGACGCTCACCAGTTTATTATTGGGAAACACCGATCGTTATGGTCTCCGGAGACCCAAAACAGGGCCCCTTGAACTCAAAAACGCCACCGGAAAAACCCCTGTTCTAGATGTGGGAGCACTCTCACATATCAAATCCGGGAAAATTAAGGTGATGCAAGGAGTGAAGGAGATAACGAGAAATAGTGTGAAGTTCGTGGATGGTCAAGAGAGAGAGTTCGATGCTATAATCTTAGCAACGGGTTACAGAAGCAACGTGCCTATTTGGCTCAAGGGGTGTGATTTTTTCACTGAAGATGGAATGCCAAAAACGCCCTTTCCAGAGAGTTGGAAGGGAGAGAATGGATTGTATACGGTGGGGTTCACCAGAAGAGGTCTGCTAGGGTCTGCTTCTGATGCCACCAAGATCGCCCAAGACATCGCTCATCGGTGGAGGACCGTGAAGGACAGCAAGAACTATCGTAATTCCCATATTGTCCTCCTCAGGAAGAGCTCGTAA 1233 0.4688 MGSYKEQQQEQAKCAWVHGPIIIGAGPSGLAVAGCLSQHGVPCVILEKSDCLASLWKHRTYDRLKLHLPKHFCELPLMGFPPNFPKYPTKYQFVSYLESYASHFSIEPRFNQTVMTAEFDQSCGFWTVRTQDFEYISRWLVVATGENAEPVIPKISGMESFHGPVVHTSLFKSGSDYKNQRVLVIGCGNSGMEASLDLCRHNAFPSMVARNTIHVLPREMFGFSTFGIAMALLKWFPLRLVDKFLLTLTSLLLGNTDRYGLRRPKTGPLELKNATGKTPVLDVGALSHIKSGKIKVMQGVKEITRNSVKFVDGQEREFDAIILATGYRSNVPIWLKGCDFFTEDGMPKTPFPESWKGENGLYTVGFTRRGLLGSASDATKIAQDIAHRWRTVKDSKNYRNSHIVLLRKSS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1487 410 Gene3D - 18 391 IPR036188 -
Lele27g1487 410 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 21 391 - -
Lele27g1487 410 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Lele27g1487 410 SUPERFAMILY FAD/NAD(P)-binding domain 180 390 IPR036188 -
Lele27g1487 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Lele27g1487 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Lele27g1487 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Lele27g1487 410 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 212 - -
Lele27g1487 410 FunFam Flavin-containing monooxygenase 20 394 - -
Lele27g1487 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Lele27g1487 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Lele27g1487 410 SUPERFAMILY FAD/NAD(P)-binding domain 21 211 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1487 Lele-ChrLele27 20909923 20912034 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1487 27 20909923 20912034 Lele01g0611 01 3585976 3589511 CCT
Lele27g1487 27 20909923 20912034 Lele02g0599 02 3588250 3597596 CCT
Lele27g1487 27 20909923 20912034 Lele03g0612 03 3598226 3605464 CCT
Lele27g1487 27 20909923 20912034 Lele04g0617 04 3728120 3735580 CCT
Lele25g0595 25 3787538 3789657 Lele27g1487 27 20909923 20912034 hybridization
Lele26g0609 26 3890764 3892915 Lele27g1487 27 20909923 20912034 hybridization