Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1484 ATGCAGACATTAACTAGACCTGAGAAAGCAGAGTTCAAGTTACTGAGATGTGTTGGGAGTCGCGCCATGGCAATCAAGAACAGGCCATTCCACGGCATCGTCCACGATGTCAAAGGAAGAGCCGCATGCTATAAACAAGATTGGATTGGCGCATTCTGTTCTGGCATAAAGATATTGGCTCCAACTTTCTACATGTTCTTCGCTTCTGCTCTCCCTGTCATTGCCTTTGGAGAACAACTTAATAAGGATACAGACGGAAGCTTGAGCACAGTAGAAACATTAGCATCAACTGCTATTTGCGGAATTATCCACTCCATATTGGGTGGACAGCCTTTGTTGATTTTGGGGGTTGCTGAACCCACTATTATAATGTATGGTTATCTGTACCAGTTTTGCAAAAAGAGGCCAGAGTTGGGAGCTAATTTGTTTCTGGCTTGGGCTGGTTGGGTCTGTGTCTGGACTGGACTCGTGTTGATTCTGCTTGCAATTTTCAATGCTTGCACGGTTATCACTAGGTTTACTAGAGTTGCAGGGGAGTTATTTGGCATGTTAATCACTGTCCTATTCTTTCAACAAGCTATAAGGGGACTAATAGGTGAGTTTGGTGTTCCCAAGGATGTAGATCCATCTGCGCAGGAATTTCAATTCCAATGGCTGTACACAAATGGATTGCTTGCGACCATTTTTGCTTTTGGGCTAATTTTCACTTCCATAAAAAGTAGAAAAGCAAGATCATGGCGATATGGAACAGGATGTCTACGAGGTCTCATCGCAGATTATGGAGTTCCGTTGATGGTTGTGTTATGGACTCTGTTATCTTATCTTGTACCAAACAAATTGCCAGATGGAGTTCCTAGAAGGCTGTTTTGTCCCCTTCCTTGGGAATCTGTCTCTCTCTACCACTGGACAGTAGTGAAGGATATGTGGAAGGTGCCTGTGGTTTATATTTTTGCTGCAATTGTTCCAGCTGTGATGATAGCAGGATTATACTTCTTTGATCATAGTGTAGCCTCCCAGATGGCTCAACAGAAGGAGTTCAACCTTCAAAAGCCATCAGCCTACCACTATGATATGTTTTTGCTTGGAATTTTGACTCTTATTTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCTCCAATGCATACAAAAAGTCTGGCGGTTCTTAAGAGGCAGATGATGCGAAAGAAGGTGGTACAGAGCGCCAAAGAATGCATTAAGTACCATAGGAGCAAATCTGAGTTGTATGGAAAGATGCAGGCAGTGTTCATAGAAATGGACACGGCCCCTACAGATAAGGAGTTACAGACTTTGAAGGAGGCTGTAATGGAACATGAGGACAAGGATGGTGAAAAAGGCCAGTTTGATCCTGAGGTACACATCGATGCCTATTTGCCAGTTAGAGTAAACGAGCAAAGAATGAGCAATGCCTTGCAGTCAATCCTTGTGGGGGCATCAATTTTTGGCATCCCCATCATCAAAAGGATCCCAACCTCTGTTCTTTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATTCTGCTTCTCTTCATCACTCCAAGCAGGAGATACAAAATCTTGGCAGGTTCTCATTCTTCATTCGTGGAGTCAGTTCCTTTCAAGAGCATAGCTTTATTCACAGTGCTGCAGCTTGTTTATTTGGTGGTTTGCTGGGGATTGACATGGATCCCTATAGGTGGAATATTGTTTCCACTACCTTTCTTCCTTCTCATATGCATAAGAGAGAATTTGCTTCCCAAGTTATTCGATCCCAACCATCTTCAGGAGCTAGATGCTTCTGAGTATGAGGAAATTGCTGGTGATCCACTTGTTTCCCGTAATATATCTCTTGTGGACAAGGTTTCGGCTGATGCTGATGGTAGTAAAGGTTCCGAAGATTTCTATGATGCTGAGATTTTGGATGAGATGACGACCAACAGGGGAGAGGTGAAATTCAGAACTGTAAGCTTCAATGGTAGAAACCTCAGCTTCAACAGTAGAAACCAGAGCTTCTCCGGGGTTAGTTGGGGCTTCGATATAAGAATAGTTGAAGATAGTCTTCTCTGGAAGATGAAAGGAGAAAGGAAAAAAGGAGCTGCATCGAATGAGAGAGGAAATGCAGAAAGGGTGAACAAATTTACAATATCGGATGAATTTTTTAGAATGAATTCCTTTAGCAGGAAAAGCTTTACGAAATGTGGAGATCAAGTTGAGAAATTTTGGCGAGTAAGGCCTATCTATGAATATATTTGCTATTACGCTTATTCCTCACATTGA 2316 0.4275 MQTLTRPEKAEFKLLRCVGSRAMAIKNRPFHGIVHDVKGRAACYKQDWIGAFCSGIKILAPTFYMFFASALPVIAFGEQLNKDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTIIMYGYLYQFCKKRPELGANLFLAWAGWVCVWTGLVLILLAIFNACTVITRFTRVAGELFGMLITVLFFQQAIRGLIGEFGVPKDVDPSAQEFQFQWLYTNGLLATIFAFGLIFTSIKSRKARSWRYGTGCLRGLIADYGVPLMVVLWTLLSYLVPNKLPDGVPRRLFCPLPWESVSLYHWTVVKDMWKVPVVYIFAAIVPAVMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDMFLLGILTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQMMRKKVVQSAKECIKYHRSKSELYGKMQAVFIEMDTAPTDKELQTLKEAVMEHEDKDGEKGQFDPEVHIDAYLPVRVNEQRMSNALQSILVGASIFGIPIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILAGSHSSFVESVPFKSIALFTVLQLVYLVVCWGLTWIPIGGILFPLPFFLLICIRENLLPKLFDPNHLQELDASEYEEIAGDPLVSRNISLVDKVSADADGSKGSEDFYDAEILDEMTTNRGEVKFRTVSFNGRNLSFNSRNQSFSGVSWGFDIRIVEDSLLWKMKGERKKGAASNERGNAERVNKFTISDEFFRMNSFSRKSFTKCGDQVEKFWRVRPIYEYICYYAYSSH 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1484 771 PANTHER ANION EXCHANGE PROTEIN 25 619 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele27g1484 771 Pfam HCO3- transporter family 223 397 IPR011531 GO:0006820|GO:0016020
Lele27g1484 771 Pfam HCO3- transporter family 28 199 IPR011531 GO:0006820|GO:0016020
Lele27g1484 771 Pfam HCO3- transporter family 471 562 IPR011531 GO:0006820|GO:0016020
Lele27g1484 771 Gene3D Helical hairpin bin 40 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1484 Lele-ChrLele27 20869248 20874713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1484 29 669 Antiporters AT4G32510 67.278 0.0 914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0600 25 3826183 3826820 Lele27g1484 27 20869248 20874713 hybridization
Lele26g0615 26 3927601 3932782 Lele27g1484 27 20869248 20874713 hybridization