Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1473 ATGGCTTTTGCGGCTTCTTCATCGTTATGCACAAAATCCTTGGCCGTTCAATGTTTCCCATCCGCTCGAAGTGAACGTTTCCTTGTGGGTGGCCTGACCTTGTCGCGTAGACCTTTGTCCTTCCCCGTCCTCGTATACCCTCGGGGTCGAGACCTCAGCTCTGCGATTGTTGCTGCATCTTCTTCTCGCAAAAAGAAAAAGAAGCAAAATTTGTCTCAAAACCACGTTAAAGTGGAGGATGAGGAAGAGGACGCTTTTGAGCTTCTTTTCAAGCAACTGGAAGAAGATCTCAAAAATGACGATATGACCTTAAATGATAGTGATGATGAAATAACCGAGGAAGACCTTGCCATGTTGGAACGGGAGTTAGAGGATGCGCTGGGGGAAGATGATGCGGAAATGTTAAACTCAGTCTTAAATGATACCAAAACTGATGTTGATGCTGCTGAAGAAGAAGAAGAAGAAGATGGGAGGCAAGTGACCCTTCGAAGCTGGCAACTACGGAAATTAGCTAAAGCTCTAAAAGCTGGTCGTCGCAAAACCAGTATCAAAAGTCTTGCTGCCGAGCTTTGTCTTGATAGGGCCTTTGTTCTTGAGTTGCTCCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTGTCGTTACCTGATGAGCCGGCAGCACCAGTAGTAGAATCTGAAGCTAAACCCTCAGAGACTGTTCTTGAAGAAATAGGCACAGATCACGTAGAGCCTGAGTCAAAGTCTAATGTACCTGTTCATGTTATGCAACATAGATGGTCTGCTCAGAAGAGATTGAAAAGGGTACACGTTGACACTCTGGAAAGAATTTATAGGAGAACAAAGCGGCCCACTAATGCAATGATCAGTAGCATCGTGCATGTAACCAACCTTCCTCGGAGGAGAGTGGTAAAATGGTTTGAAGATAAACGTGCGGAGGATGGTGTTCCCGAAGATCGTGCTCCATACCGGCGTTCTGTTTTCGTAGAATCTACCAAGTGCAATGCTCAGGACACGGCTCTGGCCACCACGAGCTCTCTGCCTTCAAGCAGTGAAAAATCCTCCAGTTCTGCTCTCCACCTCGAACTCAAAGAAGGACCGGAGAGCGACGAGGAGATCAGAAGGGTGCCGGAGTTCGGCGGTGAATCCGCCGGAACGTCTGCTTCCCGGCCGGACCCCTCTGGAGGAGTGGCTCGGGAGAGAGGAGAGAGTCAGAGGAAGAGAGGTAGAAGCGCTGCCGACAAAGAAACCAAGCGTCTCAAGAGGTTGCTGAGGAACAGAGTTTCGGCTCAGCAAGCAAGAGAGAGGAAGAAGGCATACTTGAGTGATTTGGAAATAAGGTTTAGAGACTTGGAGAAGAAGAATAAGGAGCTGGAAGAAAGATTATCCACTTTGCAGAACGAGAATCAGATGCTAAGACATATACTGAAGAACACAACTGCAAGCAGAAGAGGAGGCAGTGGTGGTGGTGTAAATGAAGGAACTTTATGA 1491 0.4755 MAFAASSSLCTKSLAVQCFPSARSERFLVGGLTLSRRPLSFPVLVYPRGRDLSSAIVAASSSRKKKKKQNLSQNHVKVEDEEEDAFELLFKQLEEDLKNDDMTLNDSDDEITEEDLAMLERELEDALGEDDAEMLNSVLNDTKTDVDAAEEEEEEDGRQVTLRSWQLRKLAKALKAGRRKTSIKSLAAELCLDRAFVLELLRDPPPNLLMMSLSLPDEPAAPVVESEAKPSETVLEEIGTDHVEPESKSNVPVHVMQHRWSAQKRLKRVHVDTLERIYRRTKRPTNAMISSIVHVTNLPRRRVVKWFEDKRAEDGVPEDRAPYRRSVFVESTKCNAQDTALATTSSLPSSSEKSSSSALHLELKEGPESDEEIRRVPEFGGESAGTSASRPDPSGGVARERGESQRKRGRSAADKETKRLKRLLRNRVSAQQARERKKAYLSDLEIRFRDLEKKNKELEERLSTLQNENQMLRHILKNTTASRRGGSGGGVNEGTL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1473 496 SUPERFAMILY Leucine zipper domain 418 476 IPR046347 GO:0003700|GO:0006355
Lele27g1473 496 CDD bZIP_HY5-like 419 470 - -
Lele27g1473 496 SMART brlzneu 414 478 IPR004827 GO:0003700|GO:0006355
Lele27g1473 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 416 479 IPR004827 GO:0003700|GO:0006355
Lele27g1473 496 Pfam bZIP transcription factor 415 475 IPR004827 GO:0003700|GO:0006355
Lele27g1473 496 SMART HOX_1 264 321 IPR001356 GO:0003677
Lele27g1473 496 ProSiteProfiles 'Homeobox' domain profile. 257 317 IPR001356 GO:0003677
Lele27g1473 496 Coils Coil 413 475 - -
Lele27g1473 496 Pfam Homeodomain 267 312 IPR001356 GO:0003677
Lele27g1473 496 MobiDBLite consensus disorder prediction 396 418 - -
Lele27g1473 496 Gene3D Single helix bin 437 478 - -
Lele27g1473 496 CDD homeodomain 260 312 IPR001356 GO:0003677
Lele27g1473 496 MobiDBLite consensus disorder prediction 339 357 - -
Lele27g1473 496 SUPERFAMILY Homeodomain-like 262 316 IPR009057 -
Lele27g1473 496 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 60 351 - -
Lele27g1473 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 421 436 IPR004827 GO:0003700|GO:0006355
Lele27g1473 496 Coils Coil 132 152 - -
Lele27g1473 496 Coils Coil 109 129 - -
Lele27g1473 496 MobiDBLite consensus disorder prediction 363 378 - -
Lele27g1473 496 MobiDBLite consensus disorder prediction 339 418 - -
Lele27g1473 496 FunFam Transcription factor HY5 437 478 - -
Lele27g1473 496 Gene3D - 259 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1473 Lele-ChrLele27 20802909 20808529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1473 358 475 bZIP Transcription Factor Family AT5G11260 72.358 1.44e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele27g1473 bZIP_1 7.5e-13 CL0018