Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1469 ATGAATTCGAGTTCGTCGGAGCCGTCGTCTGCCATGAACAAGATAGGAAGGGTATTGTACCATCAAAGGGTTACGGCGTGGCCGGCCTTAATCAGCACTGAATTCACTATGAGGATCGCTCCCATGCATAATTCATCAATAATTTCAGGTGATGGTCTTACTTTCGTTTTTGCAAGTGATCATAACCCCTCACCACCTTCTAGCTATGGCTCATATCTCGGCTTATTTGATGACTCAAATCAAGGTGAATTTCTGCAACAAATAGCTGTTGAGTTTGACATATACAAGAATGAGTTTGATAGAGATGGAAACCACGTTGGGATAGTCACAGGAAGCATCATAAGACCAGTTACTACAGAGAGTCTAAATTCCATTGGAATTAAACTAAACAGTGGACAATCCATTCAGGTCAAAATAGAGTTCGATTGTTCCATTAACATGCTTTATGTCTCCCTCGGATACTCCGAAAGTCAGTTAAAGAGCGTTCTTAACGTCACAATCGATCTGCCAAATATTGTCCCAAACGCAGTTATCAAAAACGAGACCGTTAAGACCATTCTGATCATTGCCATACCCATTTCTCTGGTCATCTTGGCAAGCTTAATTCCATTTATCTGGGAAAACTTGCAGAAAAGAGACAAGAATGAGATCTGTTACAGGCAAGATGAAATAGAATGCTCATCAATGACTGCTCTAGATATCCCCAAAGAGTTCACTTTCAGGCAATTGTATATTGCTACTAGCAGCTTCGGCAAGGAGAATCTTTTAGGAAGAGGTGGATTTGGTAGTGTTTATAAAGGCCTCCTACTTAATCCTCCAAAAACCATAGCAGTCAAGAAGATTTCAGCAAATTCCAAACAAGGAGATTTTGGCCTCGCAAGATTGCTGCAGAATGAAGAATCAGTAATCACAAACCTTGCAGGAACTCCTGGATATTTGGCTCCAGAAGTCGGTTTCACAGGGAAAGCAACCCCAGAATCAGATGTTTACAGTTTTGGGATGGTAGTTCTTGAAGTTATATGTGGAAAAAGATCAAAAAGCACAGCAGGAGATCAGTTCAGTCTGGTGGACTATGTTTGGAATATGCATAGCAAGAATGCATTGATTGAGTGCGTGGATGAACTATTAAAAGACGAGTTCGATGAGGAAGAAGTGAGAAGGGCAATGATGGTTGGGTTGGCTTGTTTGTCTCCGGATTCAATGTCAAGGCCAAAACTGAGAAAAGTGGTGCACATTTTGCTGGATCCAAAAGAGCCTTTGATGGAATTACCAGGAGTGAGACCTCTTGGAGTTTATGTGTCAGTTTCTTCATCTTTTTCGACCTCCAACTTCGGTTCCAGATGTGTGTATTCATATCCGCTGCCTCAATCGGGAACTACATCGTTAGATGAAATTAGTATTGTGTACGATCAACAGTGA 1419 0.4137 MNSSSSEPSSAMNKIGRVLYHQRVTAWPALISTEFTMRIAPMHNSSIISGDGLTFVFASDHNPSPPSSYGSYLGLFDDSNQGEFLQQIAVEFDIYKNEFDRDGNHVGIVTGSIIRPVTTESLNSIGIKLNSGQSIQVKIEFDCSINMLYVSLGYSESQLKSVLNVTIDLPNIVPNAVIKNETVKTILIIAIPISLVILASLIPFIWENLQKRDKNEICYRQDEIECSSMTALDIPKEFTFRQLYIATSSFGKENLLGRGGFGSVYKGLLLNPPKTIAVKKISANSKQGDFGLARLLQNEESVITNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGKRSKSTAGDQFSLVDYVWNMHSKNALIECVDELLKDEFDEEEVRRAMMVGLACLSPDSMSRPKLRKVVHILLDPKEPLMELPGVRPLGVYVSVSSSFSTSNFGSRCVYSYPLPQSGTTSLDEISIVYDQQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1469 472 ProSiteProfiles Protein kinase domain profile. 73 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1469 472 PANTHER - 13 282 - -
Lele27g1469 472 Gene3D Transferase(Phosphotransferase) domain 1 272 420 - -
Lele27g1469 472 ProSitePatterns Protein kinases ATP-binding region signature. 256 280 IPR017441 GO:0005524
Lele27g1469 472 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 177 IPR013320 -
Lele27g1469 472 Pfam Protein kinase domain 286 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1469 472 Pfam Legume lectin domain 12 175 IPR001220 GO:0030246
Lele27g1469 472 SMART serkin_6 250 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1469 472 Gene3D - 1 179 - -
Lele27g1469 472 SUPERFAMILY Protein kinase-like (PK-like) 237 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1469 Lele-ChrLele27 20778209 20782338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1469 281 428 Receptor kinase-like Gene Family AT5G55830 45.395 6.52e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele27g1469 Lectin_legB 1.9e-26 CL0004