Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele27g1462 | ATGGCAAAAGCAAACAAGTTCAGAGGTGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCATCCATTACTGAAGAGACGTGTGTGGCTGGGGACTTTTGAGACGGCGGAGGCGGCTGCCAGGGCATACGACCAAGCTGCCATACTGATGAATGGTCAAAATGCGAAGACGAACTTCCCGACTTCAATGTATCAGCCCCAAGACAACGCTGCTTCTTTATCTCCCAAGGCTCTTTCAGACCTTCTCAGCACGAAGCTCAGAAAATGTTGCAAAGCTCCGTCTCCTTCGCTCACTTGTCTCAGGCTTGACGCTGACAATTCTCACATTGGTGTGTGGCAGAAAGGAGCAGGACCACGTTCTGAATCTAACTGGGTCGTCAGGGTGGAGCTCGGCAACAAGGATCAGCCCAAAAAGGACGAGTCCTATTCTTCGTCGTCGGTGAGGTCATCGGTGCCGGAGACTGGTGCACAAGATGGTAACCTGTTGGTAGATGAAGAAGACATGGTCGCAATGCAGATGATTGAAGATCTTCTTAACTGGAACTATCCTTGCTCTTCGAGTGCTTCTCAGGAATTGCAAGCTAGCTAG | 597 | 0.5126 | MAKANKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSMYQPQDNAASLSPKALSDLLSTKLRKCCKAPSPSLTCLRLDADNSHIGVWQKGAGPRSESNWVVRVELGNKDQPKKDESYSSSSVRSSVPETGAQDGNLLVDEEDMVAMQMIEDLLNWNYPCSSSASQELQAS | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele27g1462 | 198 | MobiDBLite | consensus disorder prediction | 145 | 159 | - | - | |
| Lele27g1462 | 198 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 5 | 142 | - | - | |
| Lele27g1462 | 198 | MobiDBLite | consensus disorder prediction | 133 | 163 | - | - | |
| Lele27g1462 | 198 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | FunFam | Ethylene-responsive transcription factor 2 | 5 | 64 | - | - | |
| Lele27g1462 | 198 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | CDD | AP2 | 6 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | Pfam | AP2 domain | 6 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele27g1462 | 198 | SUPERFAMILY | DNA-binding domain | 6 | 65 | IPR016177 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele27g1462 | Lele-ChrLele27 | 20743408 | 20744106 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele27g1462 | 1 | 193 | AP2-EREBP Transcription Factor Family | AT5G25390 | 59.799 | 1.76e-75 | 223 |
Transcription factors information