Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1459 ATGACTTCCATTCTCTCCATCTCTAGCCATTCTCTGCCTGGCTCAACTGTTCCCTCTTCTTTCTCCCAAATCGTTTTTCCCGCCAAATCACAACGGTCGTCTTCGTCGACGCGCTCACACAAGCCTGACGAGTTCGCTGCAGGTCATATAGCTTTATCTGCTTCAACTAGTGGAAGGAGAGGGCTGCTATTTATAGCCACACTTCCATGTCTTCTTCCTTTAACTCAAATCATGGATTGTCGTGGAGCAAATTCTATCGAGTCAGGTACAAAGGAATATCCGCTCATAAAAGAAGAGGTCCGCAAGGTTTTGTCGAAGGGAAAGGCAGCAGGTGTGCTTCGTCTGGTTTTCCATGAAGCTGGGACCTTTGAAATGGATGATAATACAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGATAGACTTGAAAATTCCGGACTAAAAAAATCTATAAAGGTTCTGCAAAAAGCAAAGACTCAAATAGATTCTATAAAACCAGTATCCTGGGCAGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGCGGTATGTGGAGGACCAGAGATCCAAGTTTCAGTTGGTAGGCTAGATTCATTGGAGCCTGATCCGGAAGGGAAACTTCCTGAAGAGTCTCTTGATGCTTCTGGTTTGAAGAAATGCTTCCTGAGAAAAGGCTTCTCAACACAAGAACTCGTAGCATTGTCTGGTGCCCACACGCTTGGAAGTAAAGGTTTTGGAAGTCCGACTTCTTTTGACAATTCATATTACAAGGTTCTTCTGGAGAAGCCATGGATATCTTCAGGTGGTATGTCAAGTATGATCGGCCTTCCTTCGGATCACGCACTTGTTGAGGATGATGAATGTTTAAGGTGGATTAAAAAATATGCGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATACTGGTGTGAGTTCTAACAGAAGCATTTTCTCATCACATCGCTTTCGTTTCCTAAAGGCATGTCAGTTCAATCTTTCGGATCTCGTCGCTCGGGCTCGGATCCTCCAATCGTCATTGCCGTCGTCGGGGTCTTGGCTTGTCATTCTCGGTCAGATCTCTCCATTACTCCTCAAGTCCCTGCTCTATTTGAAGCTATTCTCCTTTTTATGGCATTTTGACTGTCGTCAGCTTTGCAAGTTCTACTCTAAACTTGAGGAAAAAATTCATGCAAAGGAAGTGGAGGAGAGTAACTTGCAAGCAAAGACCAAGATACCAACTACGAGAGCAAAATCTCCCAAGCTTGGTCGAAAGAAGAATTCAGTCAATCCAGAGTCAGATGGAAACACTGGCAGCAGTGGATATGAAGAGAACAATACATTCTCCAGTGAGATAGACGAAGCTCCATCCTGCATGGAAGAGACATCTGCAATACTCTCAGATGCCGGGGAAGCAGATTCCTATGTGAACAATGACATAGTGGTCGAAGAGCAACCTCAGCTTTCCTCGATGCAAGAACCCATTGTGGCAGAACATTAG 1524 0.4436 MTSILSISSHSLPGSTVPSSFSQIVFPAKSQRSSSSTRSHKPDEFAAGHIALSASTSGRRGLLFIATLPCLLPLTQIMDCRGANSIESGTKEYPLIKEEVRKVLSKGKAAGVLRLVFHEAGTFEMDDNTGGMNGSIVYELDRLENSGLKKSIKVLQKAKTQIDSIKPVSWADMIAVAGAEAVAVCGGPEIQVSVGRLDSLEPDPEGKLPEESLDASGLKKCFLRKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWISSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNTGVSSNRSIFSSHRFRFLKACQFNLSDLVARARILQSSLPSSGSWLVILGQISPLLLKSLLYLKLFSFLWHFDCRQLCKFYSKLEEKIHAKEVEESNLQAKTKIPTTRAKSPKLGRKKNSVNPESDGNTGSSGYEENNTFSSEIDEAPSCMEETSAILSDAGEADSYVNNDIVVEEQPQLSSMQEPIVAEH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1459 507 Gene3D Peroxidase, domain 2 209 311 - -
Lele27g1459 507 ProSiteProfiles Plant heme peroxidase family profile. 109 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 FunFam Adenylate/guanylate cyclase 209 311 - -
Lele27g1459 507 MobiDBLite consensus disorder prediction 417 472 - -
Lele27g1459 507 FunFam L-ascorbate peroxidase 99 216 - -
Lele27g1459 507 Pfam Peroxidase 98 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 295 319 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 186 198 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 109 124 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 207 224 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 127 137 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 167 185 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Plant ascorbate peroxidase signature 225 246 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 Coils Coil 397 417 - -
Lele27g1459 507 MobiDBLite consensus disorder prediction 484 507 - -
Lele27g1459 507 ProSitePatterns Peroxidases proximal heme-ligand signature. 231 241 IPR019793 -
Lele27g1459 507 ProSitePatterns Peroxidases active site signature. 109 120 IPR019794 GO:0004601
Lele27g1459 507 Gene3D - 97 318 - -
Lele27g1459 507 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 93 326 IPR044831 GO:0004601|GO:0034599
Lele27g1459 507 SUPERFAMILY Heme-dependent peroxidases 96 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele27g1459 507 MobiDBLite consensus disorder prediction 437 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1459 Lele-ChrLele27 20714331 20725019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1459 96 314 Peroxidase AT1G14540 30.182 1.66e-22 96.3