Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1458 ATGAAAAGAACCTGGTCTTTCATCCATTTCATCGGCGTTCTGTTCCTGTGTAATCTACTCTTGTCTGAAATCTGTCTGGCTGGCATTCAGACAACCGGCCCGATCTTTCCGGGGTTTGAAGGCTCTCAAATGAATTGGATTGACAAAAACGGCATGTTTCTCTTGTCAAACAATGAAGAATTTATGTTTGGCTTCATCACTACCCCGAAAGACAACACGTTATATCTTCTAGTAATCGTCCACGGTGACATTACCCAAGTGGTTTGGACGGCAAACAGAGGCCTCCCTGTTAGTAATTCTGATAATTTTGTGTTCGACAAAACCGGTAATGTCTTTCTAAAGAAAGGAAACGATGTGGTTTGGTCTACAGATACGAAGGGCAAAGGAGTTTCTTCAATGAAGTTACAGGATACAGGAAACTTAGTGTTGCTTGCTGATGATAATAGTACAATTTGGGAGAGTTTCAGCCATCCAACTGATACCTTATTGCCAATGCAGGAATTCAAAGAGGGAATGAAACTTATCAGTGAACCGGACCAATATAACTTAACCCATGTTCTGGAGATCAAATCTGGCGATTTAGTTCTCTCTGCAGGTTTTCAAAACCCACAGCCTTATTGGTCTATGCAGAATGAAGACCGCAAAATCATCGATAAAGCTGGTAACGCGGTGGTTTCAGCCTCCATTATTGCAAACTCGTGGAGGTTCTATGATAAAAATAAATCTTTGTTATGGCAGTTCATTTTTTCTGAAGATTCATCATCAGGCACAAATTCCACTTGGGTTGCTGTTTTGGGAAGTGATGGCTTCATCACTTTCTCTAATCTCAACAGTGGAGGTGCAATTACTCCCTCGCCAACAAAAATCCCAAAAGATTCTTGTAGCACACCTGAACCTTGTGGTCCTTATTCCATATGCACGGATGATAACAAGTGTCTTTGTCCTTCGGCTCTCAGATCTCGTCCCAATTGCAAACCAGGTGTTGTCTCTTCTTGTGATGGCTCAAATGGATCCGTAGAGCTTGTAGAAGGTGATGATGGACTTGGTTACTTCGCTCTTGGATTCCTTTCACCATCCTCCAAAACTGATTTGGATGGCTGTAAATCTTCCTGCCTAGGAAATTGCTCATGTCTCGCCATGTTCTTCCACAGCAATTCAGGGAACTGTTTCATGTTGGATAATATAGGAAGCTTTGAGAGTTCTGGTACAGATTCAGGTTTTGTTTCTTCCATTAAGGTCTCGAGTAACGGAGGATCTAGTTCTTCAGGGGGTGGAAGCAACAAGAAGCACACTGTGGTCGTTGTGGTTATTATCATAACAACGTTGCTTGTCATTTTGGGTTTGCTCTATGTGGGATTTAGACTCTACAGAAGAAAGCAAAAATTGCCTGAGTCTCCAAGAGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTGGCTGGTATGCCTGTCCGTTTCAGCTATAAAGAACTGCAAACAGCTACTAAGAACTTCTCTGAGAAGCTTGGGCATGGAGGTTTTGGCTCAGTTTATAAAGGGGTTCTACCAGATGGGACTCTATTAGCTGTGAAGAAGCTAGAAAGCATAGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCTTCATTTGGTCAGGCTTAAAGGATTCTGTGCTGAAGGAACTCATCGCCTTCTCGCTTACGAGTTCATGGCGAATGGCTCATTGGATAAATGGATATTCCAGAAAAATGAAGTAGAATTCATGTTGAATTGGGATACAAGGTTTAATATAGCTTTGGGCACTGCAAAAGGGCTTGCATACCTGCATGAGGATTGTGATTCAAAGATTGTTCATTGTGACATCAAACCAGAAAATGTTCTTCTGGACGAGAACTTCCTGGCCAAAGTCTCAGATTTCGGGTTGGCTAAGCTTATGACTCGGGAACAAAGCCATGTTTTTACAACACTGAGGGGAACCAGGGGATATCTTGCACCAGAATGGATCACAAACTATGCCATATCAGAGAAAAGTGATGTATATAGCTACGGGATGGTGTTACTTGAGGTCATTGGTGGAAGGAAAAACTATGATCCTAATGAATCTTCAGAGAAATCCCACTTCCCATCCTTTGCTTTCAAGATGATGGAAGAAGACAAGTTGAAAGATCTTCTTGATTCGAAGTTGAGAATAGATGAAAATGATGAAAGGTTTCATATTGCCATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTCTGAGGCCTTCCATGACCAAAGTTGTTCAGATGCTTGAAGGTCTCTCTACTGTTCCTAAGCCACCATCTTCTTCTCCCATGGGTTCTCGCCTTTACTCATCTTTCTTCAAATCCATGAGTGAAGGTGGCACCTCTTCAGGACCATCGGACTGTAATAGTGATGCATATCTTTCAGCGGTTAGGCTTTCAGGACCAAGATAA 2463 0.4227 MKRTWSFIHFIGVLFLCNLLLSEICLAGIQTTGPIFPGFEGSQMNWIDKNGMFLLSNNEEFMFGFITTPKDNTLYLLVIVHGDITQVVWTANRGLPVSNSDNFVFDKTGNVFLKKGNDVVWSTDTKGKGVSSMKLQDTGNLVLLADDNSTIWESFSHPTDTLLPMQEFKEGMKLISEPDQYNLTHVLEIKSGDLVLSAGFQNPQPYWSMQNEDRKIIDKAGNAVVSASIIANSWRFYDKNKSLLWQFIFSEDSSSGTNSTWVAVLGSDGFITFSNLNSGGAITPSPTKIPKDSCSTPEPCGPYSICTDDNKCLCPSALRSRPNCKPGVVSSCDGSNGSVELVEGDDGLGYFALGFLSPSSKTDLDGCKSSCLGNCSCLAMFFHSNSGNCFMLDNIGSFESSGTDSGFVSSIKVSSNGGSSSSGGGSNKKHTVVVVVIIITTLLVILGLLYVGFRLYRRKQKLPESPRGSSEEDNFLENLAGMPVRFSYKELQTATKNFSEKLGHGGFGSVYKGVLPDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFQKNEVEFMLNWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDENFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEVIGGRKNYDPNESSEKSHFPSFAFKMMEEDKLKDLLDSKLRIDENDERFHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLSTVPKPPSSSPMGSRLYSSFFKSMSEGGTSSGPSDCNSDAYLSAVRLSGPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1458 820 PIRSF SRK 6 816 IPR024171 GO:0004674
Lele27g1458 820 SMART blect_4 45 158 IPR001480 -
Lele27g1458 820 CDD B_lectin 47 158 IPR001480 -
Lele27g1458 820 CDD STKc_IRAK 502 769 - -
Lele27g1458 820 FunFam Serine/threonine-protein kinase 41 156 - -
Lele27g1458 820 Gene3D Phosphorylase Kinase; domain 1 464 570 - -
Lele27g1458 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 176 IPR036426 -
Lele27g1458 820 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1458 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lele27g1458 820 CDD PAN_AP_plant 328 413 - -
Lele27g1458 820 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1458 820 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Lele27g1458 820 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Lele27g1458 820 SUPERFAMILY Protein kinase-like (PK-like) 478 767 IPR011009 -
Lele27g1458 820 Gene3D - 45 157 IPR036426 -
Lele27g1458 820 FunFam serine/threonine-protein kinase PBS1-like 465 570 - -
Lele27g1458 820 Gene3D Transferase(Phosphotransferase) domain 1 571 775 - -
Lele27g1458 820 Pfam D-mannose binding lectin 87 169 IPR001480 -
Lele27g1458 820 FunFam S-receptor-like kinase 5 571 775 - -
Lele27g1458 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 777 - -
Lele27g1458 820 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1458 Lele-ChrLele27 20710582 20713044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1458 439 778 Receptor kinase-like Gene Family AT5G20050 45.580 7.37e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele27g1458 Pkinase 1.3e-50 CL0016