Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1454 ATGGAGCTTCAGTTAGGTCTGGCTCTCCCGAATCAGAATCCTATCCAGGGATTCAACCTAACCAGCCATGGCTTGGAGTGTTCAGAGTTAAGGAGGATACCCAGTTTCTGTATTGAAAGCCACAGGCATGCCAAAAACAAGCGTAGCTTTGAAGAGTCATTTGGACATTCTTCAAAAACTCTGCCTTTACTGGTATGGAACGGGCAGCCAAACGAGGAAGATTACCGTGGTGGGAAGAGGAACAGAAACACTCATCCGGAAAACGAGAATGACGAAGAAGAAAACCGTTTAGTGGGATGGCCACCCATCAAATCATGGAGGAAGAAGAAAATCCATCAGCAACAACACCCGAGAGTCCCGATCAGGAACGATAGGATCCTAGCTGAGAATGGAAATAGAAGATCAGACTCTTCATTTGTTAAGGTTAAGATGGAAGGAGTAGCTATAGGACGGAAGATCGATTTGAGGCTTTACAGCTCTTGTGAGACTCTTACAAATAAGTTAATTAGTATGTTTAATAAATACCATAAGCCTGATGAAGAAAAGGCAAGTTATACACTTACGTATCAGGACGAAGAAGGGGACTGGCTGGTTGCTGGAGATGTTCCCTGGCAATCCTTCATTCACTCGGCGAAACGCTTGGAGATAGTAAGGAGTAGCGATTTATCTCTACTAGAGCCAGCTTTCTTTGCCAAGGCAGTGCTTTTCCTTGATATGTGGGAGGCTCAAAATGAGCAAATGAAGGTTCTACTTGCAGAGCAGGAAGAGGTCTGGCTTGAAGAATCAGAAGCGGCTTGGACTGAGTATGTGGCTAGTTACGAGATGTCAGAGGCTTTGGGTGCAGAGCGAGAAAAGCGCAAGAAAAGAGGAAGCAACGACCAGGTAGACCAAAATTGTGGAGTTGGCATAAAGTCATCAATTGAGATAATAGAGATCAATGAACCATCTGAATGA 954 0.4455 MELQLGLALPNQNPIQGFNLTSHGLECSELRRIPSFCIESHRHAKNKRSFEESFGHSSKTLPLLVWNGQPNEEDYRGGKRNRNTHPENENDEEENRLVGWPPIKSWRKKKIHQQQHPRVPIRNDRILAENGNRRSDSSFVKVKMEGVAIGRKIDLRLYSSCETLTNKLISMFNKYHKPDEEKASYTLTYQDEEGDWLVAGDVPWQSFIHSAKRLEIVRSSDLSLLEPAFFAKAVLFLDMWEAQNEQMKVLLAEQEEVWLEESEAAWTEYVASYEMSEALGAEREKRKKRGSNDQVDQNCGVGIKSSIEIIEINEPSE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1454 317 Gene3D - 132 230 - -
Lele27g1454 317 MobiDBLite consensus disorder prediction 73 96 - -
Lele27g1454 317 Pfam AUX/IAA family 41 225 IPR033389 -
Lele27g1454 317 MobiDBLite consensus disorder prediction 66 96 - -
Lele27g1454 317 Coils Coil 237 257 - -
Lele27g1454 317 SUPERFAMILY CAD & PB1 domains 133 216 - -
Lele27g1454 317 ProSiteProfiles PB1 domain profile. 137 224 IPR000270 GO:0005515
Lele27g1454 317 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 222 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1454 Lele-ChrLele27 20691119 20693996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1454 127 222 B3 DNA Binding Superfamily AT3G61830 32.292 4.27e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele27g1454 AUX_IAA 1.1e-37 CL0072