Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1449 ATGGCTAAAGAAGTCACTGCTACTCCATCAGCATCTTCTTTTGACTATGTGCTCTTGGGGGATGATCATACGAATCCAAGCACTGTCAGAGGCACATCCGGCCACAGAAGTACATGGATTGAACCTGAGAGGTTGAAACTTCGGCACAGGATTGGCCGTGGACCGTTTGGTGATATTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAATACCATGAAGTTGCTGCCAAGATGTTGTATCCAATCAAAGAGGACAACTTGAGGATTGTATTAGAGAAATTTGATGAATTATATCATAAGTGCCAAGGAGTGGCTGGGGCTTGCTGGCTCCATGGAATTTCAATTTTAAACGGAAGGATATGCATCATTATGAATTTCTATGAGGGTTCTGTCGGTGATAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCATTGCACGATGTGTTGAGGTATGGAATCAATCTGGCCCAAGGTATTCTGGAACTTCATTCAAAAGGAATCCTAATTCTCAACCTTAAACCCTTTAATGTGCTTCTTGATAATAATGACCAAGCTATTTTGGGAGATTTTGGTATCCCCAGTCTTCTACTTGGCCTCTCATTCCAGGGCTCAGATATAGCTCACAGGTTGGGGACTCCAAACTACATGGCTCCAGAACAATGGCAACCTGAAGTTAGGGGCCCTATGTCCTTTGAGACGGATTCATGGGGATTTGCGTGTACAATTGTGGAAATGTTGACTGGTGATCAACCTTGGTGCGGGAGATCGGTTGGTGAAATATACCAATTAGTAGTTAGAAAGCATGAAAAACCTCTTATTCCCAGTGGTCTTCCTCCTTCAATTGAGAATATCCTCAGCGGATGCTTTGAGTATGATTTAAGGAATCGTCCCTCAATGGTGCATATTCTGAGCGTATTCAAAAGCTCTCTGGATGTGTTAGCCAATGATGGAGGATGGCAATATCTCGGAACCATGAAGGTTGCTGAAAAATCAAGTAGCACGGGCTATACAGATTGGTTTCTTTTAAAGGATCGTCTCCAGGTGAATGACATGGTAAGATCTAGAAAACCGACCAATTCATGCAAAGGCCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGTAATGCAGATCATGGTTTTGTTTTAGTGAGGGTCCATGGTATTCATGACCCTTCAAGGATTCATAGTTCAACTCTGGAGCGTGTCACATTTGGTTTGGCAGCTGGTGATTGGGTACGCTTGAAGGAAGAAGATGAGAAGCACTCGCCAGTAGGCATTCTGCATTCCATTAGCCGTGATGGTAGAGTGGCTGTTGGATTTATTGGAATGCAAACTCTTTGGACTGGTAGTTTTTCAGAACTTGAAATGGCAGAGCCTTACTGTGTGGGGCAGTTTGTAAGGCTTAAAGTCAATGTTTTGAGTCCTCGATTTGAATGGGCTCGTAAAAGGGGAGGGGCCTGGCCTACTGGAAGGATATCATGGATCCTACCAAATGGGTGTCTAAATGTCAAATTTCCAGGGATGTTGACTTTTGGGGATGAAGCTAGCACCTTCTTAGCTGATCCATCTGAGGTTGAAGCGGTTAACTTTAGTACTTGCCCTGGGATCATAGAGAAGTATAAACATGTAGAGGATCATCACTGGTTGGTCAGACCTGTCCTAATCGCATTTGGCCTGTTTACAGCTTTGAAATTAGGCTTGTCAATTGGAAAGAAAATGAGGAAGAACAAGGTGCACGCAAAAGAGAGCGAAAAGCAGCACATAGATGGCCAGAATGCTAGCAACTCTGCCTGGAGATCTTCTGGTGCTGTAAATCGTGGCAACGCAGTATGGGTTCCTTCAGTTTCCAATATTCTTTTCAGAGAAGACGCTAATGCACCAACTGATCGATAG 1914 0.4368 MAKEVTATPSASSFDYVLLGDDHTNPSTVRGTSGHRSTWIEPERLKLRHRIGRGPFGDIWLATHHQSTEDYDEYHEVAAKMLYPIKEDNLRIVLEKFDELYHKCQGVAGACWLHGISILNGRICIIMNFYEGSVGDKMARLREGRISLHDVLRYGINLAQGILELHSKGILILNLKPFNVLLDNNDQAILGDFGIPSLLLGLSFQGSDIAHRLGTPNYMAPEQWQPEVRGPMSFETDSWGFACTIVEMLTGDQPWCGRSVGEIYQLVVRKHEKPLIPSGLPPSIENILSGCFEYDLRNRPSMVHILSVFKSSLDVLANDGGWQYLGTMKVAEKSSSTGYTDWFLLKDRLQVNDMVRSRKPTNSCKGQNMDVPEGTVVGLERNADHGFVLVRVHGIHDPSRIHSSTLERVTFGLAAGDWVRLKEEDEKHSPVGILHSISRDGRVAVGFIGMQTLWTGSFSELEMAEPYCVGQFVRLKVNVLSPRFEWARKRGGAWPTGRISWILPNGCLNVKFPGMLTFGDEASTFLADPSEVEAVNFSTCPGIIEKYKHVEDHHWLVRPVLIAFGLFTALKLGLSIGKKMRKNKVHAKESEKQHIDGQNASNSAWRSSGAVNRGNAVWVPSVSNILFREDANAPTDR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1449 637 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1449 637 PANTHER OS06G0639500 PROTEIN 1 632 - -
Lele27g1449 637 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Lele27g1449 637 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lele27g1449 637 Gene3D Transferase(Phosphotransferase) domain 1 41 363 - -
Lele27g1449 637 MobiDBLite consensus disorder prediction 588 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1449 Lele-ChrLele27 20672253 20675231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1449 32 310 MAP Kinase Kinase Kinase AT2G17700 24.468 3.35e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele27g1449 PK_Tyr_Ser-Thr 9e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0657 01 3840760 3847299 Lele27g1449 27 20672253 20675231 CCT
Lele03g0657 03 3848887 3851103 Lele27g1449 27 20672253 20675231 CCT
Lele25g0635 25 4011376 4014353 Lele27g1449 27 20672253 20675231 hybridization
Lele26g0650 26 4125467 4128455 Lele27g1449 27 20672253 20675231 hybridization