Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1448 ATGTGGAGAATCCTGGCCGTTGCAACGGGGAGTACGATAGGATCTTGTGATCGAACAGATGTGAGGCTTTGTCTCTCTAAAGCTCTTAATGATCATCTTAATCATATTGTCATAGTACGCCCGCAAGAGAATGGTCTGAAGGGAGACCCGAGGTTGCGAGCCATCTCGGAAGCCATTAGAGTGGTGCCTCACTTCCCAAAACAAGGAATCATGTTTCAAGATATAACGACATTGTTGTTGAATCACAAAGTCTTCAAAGACACCGTTGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCCGCTGTTGCCGGAGTGGAAGCTCGAGGATTTATGTTTGGCCCGGCAATTGCGCTAGAAATCGGTGCAAAATTTATTCCCTTACGCAAACCAAGAAAGCTGCCAGGTGAAGTCATATCAGAAAAATATGTTCTTGAATATGGAACCGATTGTTTGGAGATGCATGTTGGGGCGGTACAGCCCGGGGAACGCGCCTTGGTTATTGATGATTTGGTCGCTACTGGTGGAACTCTATCAGCTGCAATAAGACTACTAGAACGCGTTGGTGCTGAAGTAGTTGAATGTGCTTGTGTGGTTGGTGTGCCTGAGGTTAAGGGACATCGCAGGCTTAATGGGAAGCCACTGTATGTTCTTGTGGAGCCACGTCAAATGGAGAATGGATTTTAA 690 0.4565 MWRILAVATGSTIGSCDRTDVRLCLSKALNDHLNHIVIVRPQENGLKGDPRLRAISEAIRVVPHFPKQGIMFQDITTLLLNHKVFKDTVDIFVDRYRDMDISAVAGVEARGFMFGPAIALEIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAIRLLERVGAEVVECACVVGVPEVKGHRRLNGKPLYVLVEPRQMENGF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1448 229 FunFam Adenine phosphoribosyltransferase 1 43 222 - -
Lele27g1448 229 Gene3D - 44 222 IPR029057 -
Lele27g1448 229 TIGRFAM apt: adenine phosphoribosyltransferase 56 220 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele27g1448 229 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lele27g1448 229 Pfam Phosphoribosyl transferase domain 81 206 IPR000836 -
Lele27g1448 229 SUPERFAMILY PRTase-like 58 216 IPR029057 -
Lele27g1448 229 CDD PRTases_typeI 89 221 IPR000836 -
Lele27g1448 229 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 47 223 - -
Lele27g1448 229 Hamap Adenine phosphoribosyltransferase [apt]. 55 222 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1448 Lele-ChrLele27 20663755 20667705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1448 49 221 PRT Gene Family AT1G27450 69.942 5.06e-90 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1448 27 20663755 20667705 Lele01g0646 01 3779193 3780892 CCT
Lele27g1448 27 20663755 20667705 Lele02g0632 02 3783929 3785623 CCT
Lele27g1448 27 20663755 20667705 Lele03g0645 03 3787135 3788835 CCT
Lele27g1448 27 20663755 20667705 Lele04g0652 04 3923199 3924888 CCT
Lele25g0636 25 4022479 4024643 Lele27g1448 27 20663755 20667705 hybridization
Lele26g0652 26 4138990 4143844 Lele27g1448 27 20663755 20667705 hybridization