Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1425 ATGGGTGACGAAGATGGAGAGGAAAAGGTCAAAGAGAAATTAAATGATGAGGATATGGTCAAAGTTGCAATAAGTAAGATCACGTTCATGAGTTTGGGACTTCATATGGGGAGTGCAAGTGAATACATATTTGACGTAGGACGCGGTTTCAAGTTGTTGTTGCCATCACAAAGCTCAGCGAAAGATGGCGATGTGACTGCCTTCACTTTGTCTTCCCCGAACTCTCTGGGATTTTGTTCCTCCACTCTTCAAACAAGGAAACGAAATGCGATATTACTTCGCAGGGACGGGGGTTTTCGTGTTTGGTGCATCTCCCTGTACCTCTCGGCGCCGGGGATCTCTGAAGACGAAGCGAAAATGCCGTCCCACAAGACCTTCAGAATCAAGAAGAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCAATTCCCTACTGGATCCGCATGAGGACCGACAACACCATCAGGTACAACGCCAAGCGTCGACACTGGCGCCGCACCAAGCTTGGATTCTGA 513 0.4873 MGDEDGEEKVKEKLNDEDMVKVAISKITFMSLGLHMGSASEYIFDVGRGFKLLLPSQSSAKDGDVTAFTLSSPNSLGFCSSTLQTRKRNAILLRRDGGFRVWCISLYLSAPGISEDEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1425 170 FunFam 60S ribosomal protein-like L39 120 170 - -
Lele27g1425 170 SUPERFAMILY Ribosomal protein L39e 122 169 IPR023626 -
Lele27g1425 170 Hamap 50S ribosomal protein L39e [rpl39e]. 120 170 IPR000077 GO:0003735|GO:0005840|GO:0006412
Lele27g1425 170 ProSitePatterns Ribosomal protein L39e signature. 149 165 IPR020083 GO:0003735|GO:0005840|GO:0006412
Lele27g1425 170 Pfam Ribosomal L39 protein 128 168 IPR000077 GO:0003735|GO:0005840|GO:0006412
Lele27g1425 170 PANTHER RIBOSOMAL PROTEIN L39E 112 170 - -
Lele27g1425 170 Gene3D Ribosomal protein L39e 120 170 IPR023626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1425 Lele-ChrLele27 20510097 20512938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1425 120 170 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 3.62e-29 100