Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1420 ATGGAGAGCGTGAAGCAGAAATGCAAGAGGGTTTGGGGACGATGCAGAAGCTACAACAATAACATAATCTGGAAGTTTCGAGAATCATTCGGAAAGAGTAACAACAAGAAGAATCAGGTGGCGGCTCCGAAGGGATGTCTCTGGGTGTACGTGGGACCCCATAGAGAGATATTCCTGTTGAAGATAGAGCTAGCGAATCACCCAATGTTCAAGGAGCTTCTAGATGACGCAGAGAGTGAATATGGATACAGAAACGACGGTCCCATTTGGCTTCCTTGCGATGTTAATCTCTTCTGCGAAGCAGTGGCGGAGATGGAGATAGAGATCGAAGAAGATAAGATGAGTTCTGCGTCATGGGCTTGCTCCTTTCATCATCACAAGAGTTTTCCTAACTCCCTCATGCACAGTCCTCTTTCCTATCTTTCTTCTAACCATACTGCTGTTATTGCAGATTACGAACTTTTAAGTCCCTGCAGATTGTATATTTAA 489 0.4458 MESVKQKCKRVWGRCRSYNNNIIWKFRESFGKSNNKKNQVAAPKGCLWVYVGPHREIFLLKIELANHPMFKELLDDAESEYGYRNDGPIWLPCDVNLFCEAVAEMEIEIEEDKMSSASWACSFHHHKSFPNSLMHSPLSYLSSNHTAVIADYELLSPCRLYI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1420 162 Pfam Auxin responsive protein 28 102 IPR003676 GO:0009733
Lele27g1420 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1420 Lele-ChrLele27 20468344 20468832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1420 24 103 Calmodulin-binding Proteins AT4G34750 38.750 8.36e-15 65.9